BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > NMR bookmarks
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 08-19-2010, 02:34 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,732
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default ?-Systems

?-Systems



More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Continuous-wave EPR at 275 GHz: Application to high-spin Fe3+ systems
Continuous-wave EPR at 275 GHz: Application to high-spin Fe3+ systems Publication year: 2011 Source: Journal of Magnetic Resonance, In Press, Accepted Manuscript, Available online 11 March 2011</br> G., Mathies , H., Blok , J.A.J.M., Disselhorst , P., Gast , H., van der Meer , ...</br> The 275 GHz electron-paramagnetic-resonance spectrometer we reported on in 2004 has been equipped with a new probe head, which contains a cavity especially designed for operation in continuous-wave mode. The sensitivity and signal stability that is achieved with this new probe head is illustrated...
nmrlearner Journal club 0 03-12-2011 05:21 PM
[NMR paper] 1H,15N,13C-triple resonance NMR of very large systems at 900 MHz.
1H,15N,13C-triple resonance NMR of very large systems at 900 MHz. Related Articles 1H,15N,13C-triple resonance NMR of very large systems at 900 MHz. J Magn Reson. 2003 Aug;163(2):360-8 Authors: Chung J, Kroon G We provide quantitative signal to noise data and feasibility study at 900 MHz for 1H-15N-13C triple resonance backbone assignment pulse sequences obtained from a medium sized 2H, 13C, 15N labeled protein slowed down in glycerol-water solution to mimic relaxation and spectroscopic properties of a much larger protein system with...
nmrlearner Journal club 0 11-24-2010 09:16 PM
[NMR paper] NMR spectroscopic studies of I = 1/2 metal ions in biological systems.
NMR spectroscopic studies of I = 1/2 metal ions in biological systems. Related Articles NMR spectroscopic studies of I = 1/2 metal ions in biological systems. Biochem Cell Biol. 1998;76(2-3):223-34 Authors: Oz G, Pountney DL, Armitage IM This article reviews the use of nuclear magnetic resonance methods of spin 1/2 metal nuclei to probe the metal binding site(s) in a variety of metalloproteins. The majority of the studies have involved native Zn(II) and Ca(II) metalloproteins where there has been isostructural substitution of these metal ions...
nmrlearner Journal club 0 11-17-2010 11:06 PM
[NMRwiki tweet] nmrwiki: What is the meaning of the GRPDLY parameter in @bruker #nmr systems?http://q
nmrwiki: What is the meaning of the GRPDLY parameter in @bruker #nmr systems?http://qa.nmrwiki.org/question/196/ nmrwiki: What is the meaning of the GRPDLY parameter in @bruker #nmr systems?http://qa.nmrwiki.org/question/196/ Source: NMRWiki tweets
nmrlearner Twitter NMR 0 11-11-2010 04:33 PM
NMR/Mass Spectroscopy Technician/Analyst at Sunrise Systems (La Jolla, CA)
NMR/Mass Spectroscopy Technician/Analyst at Sunrise Systems (La Jolla, CA) specialized role - NMR Project Consultant Seeking skilled NMR scientist to help with the La Jolla site NMR moves. This ... NMR/Mass Spectroscopy * Expertise with Bruker & Varian NMR Software and Hardware including cryo-probes and... More...
nmrlearner Job marketplace 0 09-26-2010 08:07 PM
[NMR paper] 1H and 31P NMR study of speciation in systems containing ADP, Al3+, and fluoride.
1H and 31P NMR study of speciation in systems containing ADP, Al3+, and fluoride. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles 1H and 31P NMR study of speciation in systems containing ADP, Al3+, and fluoride. J Inorg Biochem. 1995 Apr;58(1):29-47 Authors: Wang X, Simpson JH, Nelson DJ It has been proposed that AlF4- can serve as a tetrahedral pseudophosphate bound to guanosine diphosphate (GDP) in G-protein systems. In a previous paper , 19F and 1H NMR were used to...
nmrlearner Journal club 0 08-22-2010 03:41 AM
[Stan NMR blog] Systems of Units of Measurements
Systems of Units of Measurements Collection of references and links to measurement units. More...
nmrlearner News from NMR blogs 0 08-21-2010 06:14 PM
Sequential Assignment of Spin systems
hi, I am new to the protein NMR Field.I want to assign spin numbers to 120 amonoacid residues of a protein.I am cluless how to assing these number to each.Could anyone help me? Here is the primary sequence f a protein domain- ISLLAQRQQF WIQLEFHSRI TRGERHGVID HVGLGVQSQQ RSNGFLTSLC ILRPHYASLS LALEKAQLHS LLCEETDGEG TLEYGFMGQV KSRFTDLSRP NLFCRHLGQL LPLLRVCRDV I am expecing your help.Thank you.
ppaudyal NMR Questions and Answers 1 03-13-2009 03:14 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:24 PM.


Map