I am having trouble with importing two 3D spectra into sparky. when I open the processed (h(cco)nh & cc(co)nh) data in nmrDraw, the files look great, but after
[NMR Sparky Yahoo group] can't open *.ucsf matrices anymore (now OS 10.6.8)
can't open *.ucsf matrices anymore (now OS 10.6.8)
dear all has anyone had problems with upgrading a MacBookPro to snow leopard (10.6.8)? my problem is strange, sparky starts fine, displays dir contents
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nmrlearner
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11-09-2011 06:44 AM
[NMR Sparky Yahoo group] can't open *.ucsf matrices anymore (now OS 10.6.8)
can't open *.ucsf matrices anymore (now OS 10.6.8)
dear all has anyone had problems with upgrading a MacBookPro to snow leopard (10.6.8)? my problem is strange, sparky starts fine, displays dir contents
More...
nmrlearner
News from other NMR forums
0
10-26-2011 11:25 AM
[NMRpipe Yahoo group] Cannot execute the spript to convert varian format to nmrpipe format
Cannot execute the spript to convert varian format to nmrpipe format
Dear nmrpipe group, I have a group of data with Varian format (fid) and want to convert them to NMRPipe format (test.fid) I was able to read all data in varian
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NMRpipe Yahoo group news
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09-29-2011 07:36 PM
[CNS Yahoo group] trouble running cns on Mac OSX 10.6.8
trouble running cns on Mac OSX 10.6.8
Hi, I installed both CNS 1.21 and 1.3 on a new Mac running os x 10.6.8. I changed the location of the cns directory in the cns_solve_env for each and could
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nmrlearner
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08-19-2011 04:20 PM
[Question from NMRWiki Q&A forum] Converting from 2 column data to Topspin fid
Converting from 2 column data to Topspin fid
I am new to Topspin and would like to know if a 2 column dataset (containing time versus intensity) can be converted into an fid file that then can be processed using Topspin commands such as efp. Any guidance in this would be very welcome.
Check if somebody has answered this question on NMRWiki QA forum
nmrlearner
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06-27-2011 04:30 AM
[Question from NMRWiki Q&A forum] converting pdb to cyana library file
converting pdb to cyana library file
hello everyone,
i work on modified amino acids. i have cartesian coordinates for these residues from crystal structures as PDB . i would like to know, how to convert PDB to cyana residue library format.
if anybody wants to know further i can post the pdb coordinates.
nmrlearner
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01-05-2011 11:40 PM
[NMR paper] Proline pipe helix: structure of the tus proline repeat determined by 1H NMR.
Proline pipe helix: structure of the tus proline repeat determined by 1H NMR.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-acspubs.jpg Related Articles Proline pipe helix: structure of the tus proline repeat determined by 1H NMR.
Biochemistry. 1996 Jan 23;35(3):698-703
Authors: Butcher DJ, Nedved ML, Neiss TG, Moe GR
The structure of a 22 amino acid peptide, TPPI , that is similar to the proline repeat segment of the replication arrest protein, Tus, has been determined by 1H NMR in 50% trifluroethanol. The...
nmrlearner
Journal club
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08-22-2010 02:27 PM
UCSF Chimera - daughter of UCSF Midas & Midas Plus
UCSF Chimera - highly extensible, interactive molecular graphics program
http://www.cgl.ucsf.edu/chimera/ImageGallery/entries/semliki/semliki_th.png
UCSF Chimera home page
What can it do?Info from the Chimera website:
Molecular Graphicsinteractively manipulable stick, ball-and-stick, CPK, ribbon, and special nucleotide representations; molecular surfaces
highly intuitive translation, scaling, and rotation; Side View tool for adjusting clipping planes and scaling
interactive color editing in various color spaces (RGB, CMYK, etc.), including transparency
Trouble with converting to UCSF format from Pipe
Linear Mode
