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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


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Old 03-22-2011, 07:32 PM
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Default Re: running legacy xview X11 applications via terminal app vs xterm

Re: running legacy xview X11 applications via terminal app vs xterm

Hi Frank, To further confuse matters, on my iMac at home (running 10.6.6, with XQuartz 2.5.3) nmrDraw appears to work okay, even when launched from an xterm

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NMRpipe Yahoo group news News from other NMR forums 0 03-23-2011 07:35 AM
[NMRpipe Yahoo group] Re: running legacy xview X11 applications via terminal app vs xterm
Re: running legacy xview X11 applications via terminal app vs xterm Hi Frank, Yes, I can confirm, with XQuartz 2.5.3 on my iMac I *don't* see the problem, nmrDraw starts fine from both Terminal.app and from an xterm, however More...
NMRpipe Yahoo group news News from other NMR forums 0 03-23-2011 07:35 AM
[NMRpipe Yahoo group] Re: running legacy xview X11 applications via terminal app vs xterm
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NMRpipe Yahoo group news News from other NMR forums 0 03-22-2011 07:32 PM
[NMRpipe Yahoo group] Re: running legacy xview X11 applications via terminal app vs xterm
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NMRpipe Yahoo group news News from other NMR forums 0 03-22-2011 07:30 AM



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