BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from other NMR forums
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 06-18-2012, 12:04 PM
NMRpipe Yahoo group news's Avatar
Senior Member
 
Join Date: Aug 2010
Posts: 443
NMR Credits: 0
NMR Points: 0
Downloads: 0
Uploads: 0
Default Re: Processing interleaved pseudo 3D Bruker data

Re: Processing interleaved pseudo 3D Bruker data

Thank you Frank! I will try out your suggestion. Best regards, Jana.K

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMRpipe Yahoo group] Re: Processing interleaved pseudo 3D Bruker data
Re: Processing interleaved pseudo 3D Bruker data Dear Frank, Thanks for the clear explanation with examples on the usage of the pseudo3D.com. I will try this approach when i collect my data. Best regards, More...
NMRpipe Yahoo group news News from other NMR forums 0 06-18-2012 12:04 PM
[NMRpipe Yahoo group] Re: Processing interleaved pseudo 3D Bruker data
Re: Processing interleaved pseudo 3D Bruker data Hi All ... Sorry I didn't write sooner. I moved from the DC area to the West Coast this week. Find me in the happy town of Campbell CA, the reputed More...
NMRpipe Yahoo group news News from other NMR forums 0 06-17-2012 11:32 PM
[NMRpipe Yahoo group] Re: Processing interleaved pseudo 3D Bruker data
Re: Processing interleaved pseudo 3D Bruker data Currently, iam trying to implement a pulse sequence which requires 10 different cpmg delays (tau) and each has two interleaved data (refocused and coupled). More...
NMRpipe Yahoo group news News from other NMR forums 0 06-08-2012 08:47 PM
[NMRpipe Yahoo group] processing phase-modulated Bruker QF data
processing phase-modulated Bruker QF data Hi, Is there a way to process Bruker 2D spectra acquired with QF in t1 and end up with a phase-sensitive spectrum instead of a magnitude spectrum? I am trying More...
NMRpipe Yahoo group news News from other NMR forums 0 12-14-2011 06:42 AM
[Question from NMRWiki Q&A forum] data processing
data processing HELLO NMR WIKI ERS Could you please give information about the standred reference values of LINEAR PRIDICTION FORWRAD or BACKWORD during the processing of 3D data NMR DATA and when the sinebell shift value is needed and which wieghting function Shall i use it everytime to get good contours or signal on VNMRJ software Thanking You in anticipation Sri
nmrlearner News from other NMR forums 0 05-13-2011 07:41 AM
[NMRpipe Yahoo group] processing 2D data
processing 2D data Hi all, 1. How to get stack plots in nmrPipe. 2. I have to compare volumes of different 2D spectra. But, for each spectra different noise levels i am getting. More...
NMRpipe Yahoo group news News from other NMR forums 0 12-02-2010 08:41 AM
[NMRpipe Yahoo group] Re: processing 2D data
Re: processing 2D data ... I think that Bruker's definition of phase values is different than NMRPipe's. Specifically, NMRPipe's phase values are the negative of the Bruker ones. More...
NMRpipe Yahoo group news News from other NMR forums 0 11-03-2010 11:27 AM
[NMRpipe Yahoo group] processing 2D data
processing 2D data Hi NMRPipe users, I am yasin new user of nmrpipe. I have few problems while processing the 2D data to pipe. 1> when topspin 2.1 phase values kept in nmrpipe we More...
NMRpipe Yahoo group news News from other NMR forums 0 11-03-2010 11:27 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:49 PM.


Map