BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from other NMR forums
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 09-05-2012, 03:35 AM
NMRpipe Yahoo group news's Avatar
Senior Member
 
Join Date: Aug 2010
Posts: 443
NMR Credits: 0
NMR Points: 0
Downloads: 0
Uploads: 0
Default Re: Issues processing 2D SoFast HMQC

Re: Issues processing 2D SoFast HMQC

Hi Nichole, Iam extremely sorry about the previous post. if you have mistakenly used nd0=2 for sfhmqc, try changing this line in the nmrPipe script from -xSW

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[Question from NMRWiki Q&A forum] 1H-119Sn HMBC or HMQC
1H-119Sn HMBC or HMQC Dear experts,I want to run 1H-119Sn HMBC or HMQC, but I don't know the name of pulse program in Bruker.Do you know the name and any details regarding these measurements?Warmly thanks, Check if somebody has answered this question on NMRWiki QA forum
nmrlearner News from other NMR forums 0 06-24-2012 03:21 PM
[NMRpipe Yahoo group] 3d c13 hmqc noesy
3D C13 HMQC NOESY Hello! I am looking for a script model for 3D C13 HMQC NOESY processing. It's my first 3D experiment and I need a starting point. Thanks in advance. More...
NMRpipe Yahoo group news News from other NMR forums 0 02-27-2012 06:56 AM
[NMR Sparky Yahoo group] Re: vnm2ucsf issues
Re: vnm2ucsf issues Hi Gilles, Probably vnmr2ucsf is not using some referencing parameters from the Varian parameter files. The vnmr2ucsf program was written about 15 years ago More...
nmrlearner News from other NMR forums 0 11-09-2011 06:44 AM
[NMR Sparky Yahoo group] Re: vnm2ucsf issues
Re: vnm2ucsf issues Hi Gilles, Probably vnmr2ucsf is not using some referencing parameters from the Varian parameter files. The vnmr2ucsf program was written about 15 years ago More...
nmrlearner News from other NMR forums 0 08-30-2011 06:51 AM
[NMR Sparky Yahoo group] vnm2ucsf issues
vnm2ucsf issues Hello I'm experiencing issues when I run vnmr2ucsf, especially on 2D 1H/15N HSQC spectra. After conversion of my Varian spectra to the ucsf format, all the More...
nmrlearner News from other NMR forums 0 08-30-2011 06:51 AM
[U. of Ottawa NMR Facility Blog] 19f - 13c hmqc
19F - 13C HMQC If one has an NMR spectrometer with hardware capable of synthesizing and amplifying the frequency of 19F from the 1H channel and a broadband NMR probe whose 1H channel can tune down to 19F, then one is able to do 19F - 13C HMQC experiments. The figure below shows an example of a 19F - 13C HMQC spectrum collected on a Bruker AVANCE 500 NMR spectrometer using a 5 mm broadband probe. The fluorine spectrum is plotted on the top and the 13C spectrum is plotted on the side. The panel on the left shows the spectrum optimized for one-bond coupling, while that on the right shows the...
nmrlearner News from NMR blogs 0 08-21-2010 08:15 PM
[Stan NMR blog] NMR music and other issues
NMR music and other issues NMR education and Art - plus an apology for the author's delays More...
nmrlearner News from NMR blogs 0 08-21-2010 05:42 PM
15N SOFAST-HMQC to study fast H-D exchange
Very Fast Two-Dimensional NMR Spectroscopy for Real-Time Investigation of Dynamic Events in Proteins on the Time Scale of Seconds Paul Schanda and Bernhard Brutscher J. Am. Chem. Soc.; 2005; 127(22) pp 8014 - 8015 http://pubs.acs.org/isubscribe/journals/jacsat/127/i22/figures/ja051306en00001.gif Abstract: We demonstrate for different protein samples that 2D 1H-15N correlation NMR spectra can be recorded in a few seconds of acquisition time using a new band-selective optimized flip-angle short-transient heteronuclear multiple quantum coherence experiment. This has enabled us to...
nmrlearner Journal club 0 06-21-2005 06:21 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 11:34 PM.


Map