Hi, Just a simple question: what does the map tell you about this Tyr and its symmetry related mate ? Does it really look as if they're close to within a
[Question from NMRWiki Q&A forum] peptide protein interaction
peptide protein interaction
I have determined the structure of a 110 residues protein(11kDa) which is known to interact with a 15mer peptide. Now I am interested to know which residues of the 15mer peptide interacts with this 11kDa protein. Can anyone suggest a simple nmr experiment which can tell the residues from the 15mer peptide which interact with the protein.
Check if somebody has answered this question on NMRWiki QA forum
nmrlearner
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02-01-2011 06:40 PM
[CNS Yahoo group] igroup interaction
igroup interaction
Hello cns users: Hoping for some insight - I have a single clash in my structure - a tyrosine side chain clashes with its symmetry self. In order to handle
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nmrlearner
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12-10-2010 11:02 PM
(13)C/(15)N-(19)F Intermolecular REDOR NMR Study of the Interaction of TAR RNA with T
(13)C/(15)N-(19)F Intermolecular REDOR NMR Study of the Interaction of TAR RNA with Tat Peptides.
(13)C/(15)N-(19)F Intermolecular REDOR NMR Study of the Interaction of TAR RNA with Tat Peptides.
J Am Chem Soc. 2010 Nov 24;
Authors: Huang W, Varani G, Drobny GP
The complex of the HIV TAR RNA with the viral regulatory protein Tat is of considerable interest, but the plasticity of this interaction has made it impossible so far to establish the structure of that complex. In order to explore a new approach to obtain structural information on...
nmrlearner
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11-26-2010 05:32 PM
13C/15N-19F Intermolecular REDOR NMR Study of the Interaction of TAR RNA with Tat Pep
13C/15N-19F Intermolecular REDOR NMR Study of the Interaction of TAR RNA with Tat Peptides
Wei Huang, Gabriele Varani and Gary P. Drobny
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja1051439/aop/images/medium/ja-2010-051439_0005.gif
Journal of the American Chemical Society
DOI: 10.1021/ja1051439
http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA
http://feeds.feedburner.com/~r/acs/jacsat/~4/bKQhcXWaqW0
nmrlearner
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11-25-2010 07:22 AM
[NMR paper] NMR study on the interaction between RPA and DNA decamer containing cis-syn cyclobuta
NMR study on the interaction between RPA and DNA decamer containing cis-syn cyclobutane pyrimidine dimer in the presence of XPA: implication for damage verification and strand-specific dual incision in nucleotide excision repair.
Related Articles NMR study on the interaction between RPA and DNA decamer containing cis-syn cyclobutane pyrimidine dimer in the presence of XPA: implication for damage verification and strand-specific dual incision in nucleotide excision repair.
Nucleic Acids Res. 2003 Aug 15;31(16):4747-54
Authors: Lee JH, Park CJ, Arunkumar...
nmrlearner
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11-24-2010 09:16 PM
[NMR paper] Interaction between beta-Purothionin and dimyristoylphosphatidylglycerol: a (31)P-NMR
Interaction between beta-Purothionin and dimyristoylphosphatidylglycerol: a (31)P-NMR and infrared spectroscopic study.
Related Articles Interaction between beta-Purothionin and dimyristoylphosphatidylglycerol: a (31)P-NMR and infrared spectroscopic study.
Biophys J. 2002 Oct;83(4):2074-83
Authors: Richard JA, Kelly I, Marion D, Pézolet M, Auger M
The interaction of beta-purothionin, a small basic and antimicrobial protein from the endosperm of wheat seeds, with multilamellar vesicles of dimyristoylphosphatidylglycerol (DMPG) was investigated...
nmrlearner
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11-24-2010 08:58 PM
[NMR paper] The ATP/metallothionein interaction: NMR and STM.
The ATP/metallothionein interaction: NMR and STM.
Related Articles The ATP/metallothionein interaction: NMR and STM.
Biochemistry. 2002 Feb 5;41(5):1689-94
Authors: Maret W, Heffron G, Hill HA, Djuricic D, Jiang LJ, Vallee BL
We have previously established that ATP binds to mammalian metallothionein-2 (MT). The interaction between ATP and MT and the associated conformational change of the protein affect the sulfhydryl reactivity and zinc transfer potential of MT . NMR spectroscopic investigations have now provided further evidence for the...
nmrlearner
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11-24-2010 08:49 PM
[NMR paper] 13C and 15N NMR studies on the interaction between 6,7-dimethyl-8-ribityllumazine and
13C and 15N NMR studies on the interaction between 6,7-dimethyl-8-ribityllumazine and lumazine protein.
Related Articles 13C and 15N NMR studies on the interaction between 6,7-dimethyl-8-ribityllumazine and lumazine protein.
Biochemistry. 1990 Feb 20;29(7):1823-8
Authors: Vervoort J, O'Kane DJ, Müller F, Bacher A, Strobl G, Lee J
The interaction between the prosthetic group 6,7-dimethyl-8-(1'-D-ribityl)lumazine and the lumazine apoproteins from two marine bioluminescent bacteria, one from a relatively thermophilic species, Photobacterium...
Re: igroup interaction
Linear Mode
