CNS Yahoo group Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel

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[CNS Yahoo group] Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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02-09-2011, 08:23 PM

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Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel

Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel

Hi Nate, ... That looks fine. The hpc.sourceforge.net compilers install to /usr/local/bin, so you can also run 'which gfortran' to ensure that it's picking up

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[CNS Yahoo group] Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Update so far, I tested on a 64-bit Mac and didn't get the "Bad CPU type in executable" message. It still didn't install correctly but perhaps I'm getting More...	nmrlearner	News from other NMR forums	0	02-11-2011 08:31 AM
[CNS Yahoo group] Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Hi Ben, I'll tinker with the Makefiles per your suggestion and see if I can make some progress. Thanks again ! ... Nate Michals Jr. Systems Administrator More...	nmrlearner	News from other NMR forums	0	02-10-2011 08:25 AM
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[CNS Yahoo group] Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel ... That would explain it, but then this in CNS installation instructions must be incorrect: "A binary installation is available for Intel Macintosh OS X, More...	nmrlearner	News from other NMR forums	0	02-09-2011 08:23 PM
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[CNS Yahoo group] Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Re: CNS Solve 1.3, "Bad CPU Type in Executable", OSX 10.6.6, Intel Hi Nate, ... That only produces an error when running as root. The default user privilege on OS X only allows setting the max stacksize to the kernel max More...	nmrlearner	News from other NMR forums	0	02-09-2011 08:23 PM
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