NMRpipe Yahoo group Re: baseline correction - BioNMR

BioNMR

NMR aggregator & online community since 2003

BioNMR

Learn or help to learn NMR - get free NMR books!

Ask NMR questions!

Earn NMR points

Redeem NMR points

Vote for NMR papers

Ask to aggregate a site

Our Linkedin group

		BioNMR > NMR community > News from other NMR forums
[NMRpipe Yahoo group] Re: baseline correction

Pulse sequences

Software forums

Webservers

NMR processing:

NMR assignment:

Backbone:

Side-chains:

UNIO ATNOS-Ascan

NOEs:

UNIO ATNOS-Candid

Structure from NMR restraints:

Ab initio:

UNIO ATNOS-Candid

Fragment-based:

BMRB CS-Rosetta

Rosetta-NMR (Robetta)

Template-based:

Refinement:

Structure from chemical shifts:

Fragment-based:

WeNMR CS-Rosetta

BMRB CS-Rosetta

Homology-based:

Torsion angles from chemical shifts:

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

MICS caps, β-turns

Flexibility from chemical shifts:

Interactions from chemical shifts:

Chemical shifts re-referencing:

UNIO Shiftinspector

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

Resolution-by-Proxy

SAVES2 or SAVES4

Ramachandran Plot

Quality Control Check

NMR spectrum prediction:

Flexibility from structure:

Molecular dynamics:

Chemical shifts prediction:

From structure:

CH3shift- Methyl

ArShift- Aromatic

CheShift-2- Cα

From sequence:

Disordered proteins:

Format conversion & validation:

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

Protein solubility:

Isotope labeling:

Solid-state NMR:

Reply

Search this Thread

Rate Thread

#1

Old

01-12-2013, 03:01 AM

NMRpipe Yahoo group news NMRpipe Yahoo group news is offline

NMRpipe Yahoo group news is offline

Senior Member

Join Date: Aug 2010

Posts: 443

NMR Credits: 0

NMR Points: 0

Downloads: 0

Uploads: 0

Default

Re: baseline correction

Re: baseline correction

Thanks Frank! ... Not much to do about that then as bruker machines are the only ones at my disposal :) ... This actually does improve the distortions (but not

More...

Reply With Quote

Did you find this post helpful?

|

Reply

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMRpipe Yahoo group] Re: baseline correction Re: baseline correction Ok, one more trick, hope it helps! For a given vector-based nmrPipe processing function, you can select which vectors from the data are passed to it, and which More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-12-2013 03:01 AM
[NMRpipe Yahoo group] Re: baseline correction Re: baseline correction Bruker needs to have good baseline correction facilities in their software because their acquistion methods result in such badly distorted baselines. That More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-10-2013 10:43 AM
[NMRpipe Yahoo group] Re: baseline correction Re: baseline correction Dear Pipe users, I have the same problem as Kate: heavy baseline distortions in the acquisition dimension in the methyl region of some of my 2D and 3D noesys. More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-08-2013 09:23 AM
[Question from NMRWiki Q&A forum] qfil: baseline correction qfil: baseline correction "the t1 dimensio was processed using the baseline correction mode “qfil” in theXWINNMR software" Does anyone know about "qfil" method in XWINNMR?How can I realize the "qfil" in vnmrJ? Thanks in advance!	nmrlearner	News from other NMR forums	0	09-12-2012 05:15 PM
Sequence correction of random coil chemical shifts: correlation between neighbor correction factors and changes in the Ramachandran distribution Sequence correction of random coil chemical shifts: correlation between neighbor correction factors and changes in the Ramachandran distribution Abstract Random coil chemical shifts are necessary for secondary chemical shift analysis, which is the main NMR method for identification of secondary structure in proteins. One of the largest challenges in the determination of random coil chemical shifts is accounting for the effect of neighboring residues. The contributions from the neighboring residues are typically removed by using neighbor correction factors determined based on each...	nmrlearner	Journal club	0	06-06-2011 12:53 AM
Singular spectrum analysis for an automated solvent artifact removal and baseline correction of 1D NMR spectra. Singular spectrum analysis for an automated solvent artifact removal and baseline correction of 1D NMR spectra. Singular spectrum analysis for an automated solvent artifact removal and baseline correction of 1D NMR spectra. J Magn Reson. 2011 Mar 6; Authors: De Sanctis S, Malloni WM, Kremer W, Tomé AM, Lang EW, Neidig KP, Kalbitzer HR NMR spectroscopy in biology and medicine is generally performed in aqueous solutions, thus in (1)H NMR spectroscopy, the dominant signal often stems from the partly suppressed solvent and can be many orders of...	nmrlearner	Journal club	0	04-05-2011 10:22 PM
[NMRpipe Yahoo group] Re: Rolling Baseline Re: Rolling Baseline Replacing forst points is done via "LP -before" ... for example, to replace points 1 to 8 with 12 LP coefficients: LP -before -pred 8 -ord 12 The flags "-b" More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-03-2010 11:27 AM
[NMRpipe Yahoo group] Rolling Baseline Rolling Baseline Hi NMRPipe users, I have a spectrum with a very strong rolling baseline caused by a background material signal. I have tried to use LP to correct the first few More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-01-2010 11:07 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off