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[NMRpipe Yahoo group] Re: 3D cube representation of NMRPipe data

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NMR processing:

NMR assignment:

Backbone:

Side-chains:

UNIO ATNOS-Ascan

NOEs:

UNIO ATNOS-Candid

Structure from NMR restraints:

Ab initio:

UNIO ATNOS-Candid

Fragment-based:

BMRB CS-Rosetta

Rosetta-NMR (Robetta)

Template-based:

Refinement:

Structure from chemical shifts:

Fragment-based:

WeNMR CS-Rosetta

BMRB CS-Rosetta

Homology-based:

Torsion angles from chemical shifts:

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

MICS caps, β-turns

Flexibility from chemical shifts:

Interactions from chemical shifts:

Chemical shifts re-referencing:

UNIO Shiftinspector

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

Resolution-by-Proxy

SAVES2 or SAVES4

Ramachandran Plot

Quality Control Check

NMR spectrum prediction:

Flexibility from structure:

Molecular dynamics:

Chemical shifts prediction:

From structure:

CH3shift- Methyl

ArShift- Aromatic

CheShift-2- Cα

From sequence:

Disordered proteins:

Format conversion & validation:

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

Protein solubility:

Isotope labeling:

Solid-state NMR:

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07-11-2011, 07:41 AM

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Re: 3D cube representation of NMRPipe data

Re: 3D cube representation of NMRPipe data

Thanks a lot for the script. How do I export the image I obtained from nmrCube.tcl to, say, a postscript file? Thanks in advance. Best regards, George

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[NMRpipe Yahoo group] Re: 3D cube representation of NMRPipe data Re: 3D cube representation of NMRPipe data Thanks a lot for the script. How do I export the image I obtained from nmrCube.tcl to, say, a postscript file ? Thanks in advance. Best regards, George More...	NMRpipe Yahoo group news	News from other NMR forums	0	07-11-2011 07:41 AM
[NMRpipe Yahoo group] Re: 3D cube representation of NMRPipe data [1 Attachment] Re: 3D cube representation of NMRPipe data Looks pretty awesome! Thanks for the script! Is there a possibility to save the image somehow? justin -- Justin Lecher Institute of Complex Systems ICS-6 More...	NMRpipe Yahoo group news	News from other NMR forums	0	03-21-2011 07:27 PM
[NMRpipe Yahoo group] Re: 3D cube representation of NMRPipe data [1 Attachment] Re: 3D cube representation of NMRPipe data Try downloading and installing the latest version of NMRPipe, which includes an updated version of nmrCube.tcl and other items that this script requires. As More...	NMRpipe Yahoo group news	News from other NMR forums	0	03-20-2011 07:14 PM
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[NMRpipe Yahoo group] Re: 3D cube representation of NMRPipe data Re: 3D cube representation of NMRPipe data Quoting Douglas Kojetin : Here's a script to make a crude 3D cube-display, but no axis labels. I made it, huzzah. cheerful regards, More...	NMRpipe Yahoo group news	News from other NMR forums	0	02-18-2011 10:01 PM
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