NMR Sparky Yahoo group Re: 2d noesy peaks integartion error linefit faileld to converge

		BioNMR > NMR community > News from other NMR forums
[NMR Sparky Yahoo group] Re: 2d noesy peaks integartion error linefit faileld to converge

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

02-07-2012, 05:09 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Re: 2d noesy peaks integartion error linefit faileld to converge

Re: 2d noesy peaks integartion error linefit faileld to converge

Hi Srinivas ... this is normally ok, unless you use an exponential window. ... this should be YES in almost all cases I can think of. if it fails to converge

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR Sparky Yahoo group] 2d noesy peaks integartion error linefit faileld to converge 2d noesy peaks integartion error linefit faileld to converge Hello sparky users , I am using 2D noesy spectrum (H,H) to do structure calculation , while doing peak integration it is showing errors as follows . Linefit More...	nmrlearner	News from other NMR forums	0	02-07-2012 04:14 AM
[Question from NMRWiki Q&A forum] Auto peak picking of N15Edit NOESY and C13 Edit NOESY spectrum Auto peak picking of N15Edit NOESY and C13 Edit NOESY spectrum Dear friends, I am in process of doing structure calculation of a dimeric protein. The problem I faced is regarding the assignment of N15Edit NOESY and C13 Edit NOESY spectrum.I have already processed the fid data and converted to sparky ucsf format. Is there options available in sparky for auto peak picking, integration and assignment of my NOESY spectrum? And second query is regarding the generation of input files for structure calculation. In our Lab we are using ARIA 2.1 software for structure calculation? Is there any...	nmrlearner	News from other NMR forums	0	12-14-2011 07:14 PM
[NMRpipe Yahoo group] Re: Error in script Re: Error in script Is it possible that your first fid terminated prematurely and is not the same size as you expected it to be? Were you able to process your data files More...	NMRpipe Yahoo group news	News from other NMR forums	0	05-27-2011 10:40 AM
[NMRpipe Yahoo group] Error in script Error in script This is the script I have used to process relaxation data in the past. However I am now getting an error. Can anyone help me figure out where the error in my More...	NMRpipe Yahoo group news	News from other NMR forums	0	05-16-2011 08:22 AM
[NMRwiki tweet] nmrwiki: what is error 113 in @bruker #nmr software? http://qa.nmrwiki.org/question/251/error-113-lid-is-close nmrwiki: what is error 113 in @bruker #nmr software? http://qa.nmrwiki.org/question/251/error-113-lid-is-close nmrwiki: what is error 113 in @bruker #nmr software? http://qa.nmrwiki.org/question/251/error-113-lid-is-close Source: NMRWiki tweets	nmrlearner	Twitter NMR	0	04-15-2011 01:40 AM
[Question from NMRWiki Q&A forum] Error 113: lid is close Error 113: lid is close Was trying to lift sample in BMSB control suite... but the machine detected sample within and an error 113 popped out. Anyone knows how to solve this? Thanks in advance. Check if somebody has answered this question on NMRWiki QA forum	nmrlearner	News from other NMR forums	0	04-12-2011 01:10 PM
[NMRpipe Yahoo group] Error in script Error in script This is the script I have used to process relaxation data in the past. However I am now getting an error. Can anyone help me figure out where the error in my More...	NMRpipe Yahoo group news	News from other NMR forums	0	04-12-2011 01:07 AM
[NMR paper] Suppression of diagonal peaks in TROSY-type 1H NMR NOESY spectra of 15N-labeled prote Suppression of diagonal peaks in TROSY-type 1H NMR NOESY spectra of 15N-labeled proteins. Related Articles Suppression of diagonal peaks in TROSY-type 1H NMR NOESY spectra of 15N-labeled proteins. J Magn Reson. 1999 Oct;140(2):499-503 Authors: Meissner A, Sørensen OW A novel method for suppression of diagonal peaks in the amide region of NOESY NMR spectra of 15N-labeled proteins is presented. The method is particularly useful for larger proteins at high magnetic fields where interference between dipolar and chemical shift anisotropy relaxation...	nmrlearner	Journal club	0	11-18-2010 08:31 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off