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[NMRpipe Yahoo group] processing hmbc

Pulse sequences

Software forums

Webservers

NMR processing:

NMR assignment:

Backbone:

Side-chains:

UNIO ATNOS-Ascan

NOEs:

UNIO ATNOS-Candid

Structure from NMR restraints:

Ab initio:

UNIO ATNOS-Candid

Fragment-based:

BMRB CS-Rosetta

Rosetta-NMR (Robetta)

Template-based:

Refinement:

Structure from chemical shifts:

Fragment-based:

WeNMR CS-Rosetta

BMRB CS-Rosetta

Homology-based:

Torsion angles from chemical shifts:

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

MICS caps, β-turns

Flexibility from chemical shifts:

Interactions from chemical shifts:

Chemical shifts re-referencing:

UNIO Shiftinspector

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

Resolution-by-Proxy

SAVES2 or SAVES4

Ramachandran Plot

Quality Control Check

NMR spectrum prediction:

Flexibility from structure:

Molecular dynamics:

Chemical shifts prediction:

From structure:

CH3shift- Methyl

ArShift- Aromatic

CheShift-2- Cα

From sequence:

Disordered proteins:

Format conversion & validation:

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

Protein solubility:

Isotope labeling:

Solid-state NMR:

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10-20-2011, 09:45 AM

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processing hmbc

processing hmbc

Hi everybody, I am processing HMBC experiment with nmrPipe and I am using standard scripts below. In first script since I have xN 478 data points I made xT

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[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Dear Andrew, Thank you for answer. I talked to our facility manager and he said that he usually uses phase sensitive detection for HMBC for example More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-11-2011 08:26 AM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Anna Kuznetsova asks about processing an HMBC. I think the key quote is "So instead of many absorptive peaks of HMBC I get 4 times more peaks with alternating More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-09-2011 06:44 AM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Thanks for this thorough and helpful response from Andrew. Just to amplify one item ... the nmrPipe "FT" function will work with any number of points. It will More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-09-2011 06:44 AM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Dear Eugene, Thank you for answer! Actually I have figured out how to process HMBC with nmrpipe. It turned out pulse sequence I was using for HMBC is phase More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-04-2011 03:17 AM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc ... You're welcome. ... yN=yT, etc. for TPPI or any other data dimension acquired in a "real" mode. In modern BioNMR, this is mostly a few magnitude mode More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-04-2011 03:17 AM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Hi Anna, Typically, the HMBC acquisition is absolute value mode, so -yMODE and -aq2D should be "Real" and "Magnitude", respectively, and -yT and -yN should be More...	NMRpipe Yahoo group news	News from other NMR forums	0	11-04-2011 03:17 AM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Thanks for this thorough and helpful response from Andrew. Just to amplify one item ... the nmrPipe "FT" function will work with any number of points. It will More...	NMRpipe Yahoo group news	News from other NMR forums	0	10-20-2011 09:51 PM
[NMRpipe Yahoo group] Re: processing hmbc Re: processing hmbc Anna Kuznetsova asks about processing an HMBC. I think the key quote is "So instead of many absorptive peaks of HMBC I get 4 times more peaks with alternating More...	NMRpipe Yahoo group news	News from other NMR forums	0	10-20-2011 09:51 PM

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