NMRpipe Yahoo group nmrppipe IO variables - BioNMR

BioNMR

NMR aggregator & online community since 2003

BioNMR

Learn or help to learn NMR - get free NMR books!

Ask NMR questions!

Earn NMR points

Redeem NMR points

Vote for NMR papers

Ask to aggregate a site

Our Linkedin group

		BioNMR > NMR community > News from other NMR forums
[NMRpipe Yahoo group] nmrppipe IO variables

Pulse sequences

Software forums

Webservers

NMR processing:

NMR assignment:

Backbone:

Side-chains:

UNIO ATNOS-Ascan

NOEs:

UNIO ATNOS-Candid

Structure from NMR restraints:

Ab initio:

UNIO ATNOS-Candid

Fragment-based:

BMRB CS-Rosetta

Rosetta-NMR (Robetta)

Template-based:

Refinement:

Structure from chemical shifts:

Fragment-based:

WeNMR CS-Rosetta

BMRB CS-Rosetta

Homology-based:

Torsion angles from chemical shifts:

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

MICS caps, β-turns

Flexibility from chemical shifts:

Interactions from chemical shifts:

Chemical shifts re-referencing:

UNIO Shiftinspector

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

Resolution-by-Proxy

SAVES2 or SAVES4

Ramachandran Plot

Quality Control Check

NMR spectrum prediction:

Flexibility from structure:

Molecular dynamics:

Chemical shifts prediction:

From structure:

CH3shift- Methyl

ArShift- Aromatic

CheShift-2- Cα

From sequence:

Disordered proteins:

Format conversion & validation:

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

Protein solubility:

Isotope labeling:

Solid-state NMR:

Reply

Search this Thread

Rate Thread

#1

Old

01-22-2011, 03:46 AM

NMRpipe Yahoo group news NMRpipe Yahoo group news is offline

NMRpipe Yahoo group news is offline

Senior Member

Join Date: Aug 2010

Posts: 443

NMR Credits: 0

NMR Points: 0

Downloads: 0

Uploads: 0

Default

nmrppipe IO variables

nmrppipe IO variables

Hi all, NMR_IO_TIMEOUT NMR_IO_SELECT NMR_AUTOSWAP What does these three variables controll exactly and how to I optimize them? Thanks justin -- Justin Lecher

More...

Reply With Quote

Did you find this post helpful?

|

Reply

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMRpipe Yahoo group] lacking environmental variables after installation lacking environmental variables after installation HI! We followed the installation instructions and the .cshrc file was modified but not sufficiently to define all the environmental variables. We use Ubuntu More...	NMRpipe Yahoo group news	News from other NMR forums	0	02-06-2012 03:54 PM
[NMRpipe Yahoo group] Re: lacking environmental variables after installation Re: lacking environmental variables after installation First, be sure you have logged out and logged in again after changing ".cshrc". Then, try the command "printenv" ... the PATH environment variable should More...	NMRpipe Yahoo group news	News from other NMR forums	0	02-06-2012 03:54 PM
[NMRpipe Yahoo group] Re: More details Re: lacking environmental variables after installat Re: More details Re: lacking environmental variables after installat It's helpful that you sent all these details. It might be handy to review some UNIX command-line tutorials at some time, because in order to use NMRPipe, More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-12-2012 09:30 PM
[NMRpipe Yahoo group] Re: lacking environmental variables after installation Re: lacking environmental variables after installation First, be sure you have logged out and logged in again after changing ".cshrc". Then, try the command "printenv" ... the PATH environment variable should More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-12-2012 09:30 PM
[NMRpipe Yahoo group] More details Re: lacking environmental variables after installation More details Re: lacking environmental variables after installation Hi! I am trying to install nmrpipe on 32 bit Ubuntu. When I typed printenv, I couldn't get the environmental variables as mentioned in the installation More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-12-2012 09:30 PM
[NMRpipe Yahoo group] lacking environmental variables after installation lacking environmental variables after installation HI! We followed the installation instructions and the .cshrc file was modified but not sufficiently to define all the environmental variables. We use Ubuntu More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-11-2012 04:03 AM
[NMRpipe Yahoo group] Re: nmrppipe IO variables Re: nmrppipe IO variables Thanks Frank for the explanations, Justin -- Justin Lecher Institute of Complex Systems ICS-6 Structural Biochemistry Research Centre Juelich 52425 Juelich, More...	NMRpipe Yahoo group news	News from other NMR forums	0	05-27-2011 10:40 AM
[NMRpipe Yahoo group] Re: nmrppipe IO variables Re: nmrppipe IO variables NMR_AUTOSWAP toggles whether or not the programs of NMRPipe will attempt to automatically make adjustments according to whether the given NMRPipe-format data More...	NMRpipe Yahoo group news	News from other NMR forums	0	01-22-2011 03:46 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off