Question from NMRWiki Q&A forum method validation in nmr

		BioNMR > NMR community > News from other NMR forums
[Question from NMRWiki Q&A forum] method validation in nmr

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-08-2016, 03:00 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,697

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

method validation in nmr

method validation in nmr

please tell me whether there are method validation in nmr

Check if somebody has answered this question on NMRWiki QA forum

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR images] claims 33 1 a method for quantifying cell number in vivo the method ... http://patentimages.storage.googleapis.com/US8263043B2/US08263043-20120911-D00015.png 26/03/2014 12:35:52 AM GMT claims 33 1 a method for quantifying cell number in vivo the method ... More...	nmrlearner	NMR pictures	0	03-26-2014 12:35 AM
[NMR paper] An overview of tools for the validation of protein NMR structures. An overview of tools for the validation of protein NMR structures. An overview of tools for the validation of protein NMR structures. J Biomol NMR. 2013 Jul 23; Authors: Vuister GW, Fogh RH, Hendrickx PM, Doreleijers JF, Gutmanas A Abstract Biomolecular structures at atomic resolution present a valuable resource for the understanding of biology. NMR spectroscopy accounts for 11*% of all structures in the PDB repository. In response to serious problems with the accuracy of some of the NMR-derived structures and in order to facilitate...	nmrlearner	Journal club	0	07-24-2013 04:52 PM
[NMR paper] Discovery and validation of SIRT2 inhibitors based on tenovin-6: use of a ¹H-NMR method to assess deacetylase activity. Discovery and validation of SIRT2 inhibitors based on tenovin-6: use of a ¹H-NMR method to assess deacetylase activity. Related Articles Discovery and validation of SIRT2 inhibitors based on tenovin-6: use of a ¹H-NMR method to assess deacetylase activity. Molecules. 2012;17(10):12206-24 Authors: Pirrie L, McCarthy AR, Major LL, Mork?nait? V, Zubrien? A, Matulis D, Lain S, Lebl T, Westwood NJ Abstract The search for potent and selective sirtuin inhibitors continues as chemical tools of this type are of use in helping to assign the function...	nmrlearner	Journal club	0	03-22-2013 06:10 PM
PDBe Vivaldi: Visualisation and Validation Display for NMR PDBe Vivaldi: Visualisation and Validation Display for NMR PDBe Vivaldi is a tool to interactively present information about the homogeneity of the modeled NMR ensemble, validation of experimental chemical shifts, residual dipolar coupling (RDC) and distance restraints and validation scores based on empirical knowledge and databases. It focuses on bringing together many aspects of NMR structure validation and on facilitating the visual assessment of the quality of the modeled NMR structure ensemble. The interactive wizard, manual and frequently asked question sections provide an easy...	nmrlearner	General	0	12-14-2011 07:14 PM
[CNS Yahoo group] First contours of a vision for the future of validation at the PDB First contours of a vision for the future of validation at the PDB (Posted on behalf of wwPDB) The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is pleased to direct PDB depositors and users to the recommendations of the More...	nmrlearner	News from other NMR forums	0	11-09-2011 06:44 AM
[CNS Yahoo group] First contours of a vision for the future of validation at the PDB First contours of a vision for the future of validation at the PDB (Posted on behalf of wwPDB) The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is pleased to direct PDB depositors and users to the recommendations of the More...	nmrlearner	News from other NMR forums	0	10-14-2011 07:34 PM
[NMR paper] Validation of a noninvasive method to measure brain temperature in vivo using 1H NMR Validation of a noninvasive method to measure brain temperature in vivo using 1H NMR spectroscopy. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_120x27.gif Related Articles Validation of a noninvasive method to measure brain temperature in vivo using 1H NMR spectroscopy. J Neurochem. 1995 Mar;64(3):1224-30 Authors: Corbett RJ, Laptook AR, Tollefsbol G, Kim B The goal of this study was to evaluate the potential of using the difference between the 1H NMR...	nmrlearner	Journal club	0	08-22-2010 03:41 AM
[CNS Yahoo group] SAXS/validation post-doc position available SAXS/validation post-doc position available There is an EMBL Interdisciplinary Post-doc ("EIPOD") position available to work on the validation of low-resolution structural models obtained from More...	nmrlearner	News from other NMR forums	0	08-21-2010 03:26 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off