Question from NMRWiki Q&A forum hsqc referencing

		BioNMR > NMR community > News from other NMR forums
[Question from NMRWiki Q&A forum] hsqc referencing

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

10-24-2013, 08:45 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

hsqc referencing

hsqc referencing

Hi!I need to know how to reference nitrogen 15 from proton in a foldel hsqc experiment...I don't know how to calculate the new 'lowest frequency' from the parameters I have in the processed spectrum...could someone help me?thanks!!

Check if somebody has answered this question on NMRWiki QA forum

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
1H-15N HSQC, edited by a 1H inversion recovery and observed in the antiphase component (IR-HSQC-AP) Could someone explain the experimental theory/basis behind 1H-15N inversion recovery filtered HSQC experiment observed in antiphase (IR-HSQC-AP)? I am still learning basic NMR theory, but would like to know about this particular experiment, which was used to detect paramagnetically broadened backbone resonances. Thanks. Abstract Biogenesis of iron–sulfur cluster proteins is a highly regulated process that requires complex protein machineries. In the cytosolic iron–sulfur protein assembly machinery, two human key proteins—NADPH-dependent diflavin oxidoreductase 1 (Ndor1) and...	talderson	NMR Questions and Answers	0	09-23-2013 06:01 AM
[NMRpipe Yahoo group] 1D referencing for NMRView via pipe2xyz 1D referencing for NMRView via pipe2xyz Dear Pipers, I'm experiencing difficulty with preservation of spectral referencing parameters when converting 1D NMRPipe spectra into 1D NMRView spectra. OS: More...	NMRpipe Yahoo group news	News from other NMR forums	0	07-25-2012 09:34 PM
[NMR Sparky Yahoo group] Referencing of 2D C13HSQC spectra Referencing of 2D C13HSQC spectra Dear Friends, * I am new to doing NMR assignment using Sparky3.1.4 . I processed my 3D HNCA ( 2048x 512x 256 complex points ) and 2D C13HQSC(2048x 512complex More...	nmrlearner	News from other NMR forums	0	03-25-2012 06:28 PM
[NMRpipe Yahoo group] Re: indirect referencing Re: indirect referencing Hi Frans, Thanks for keeping this important topic in mind. By nice coincidence, I started on some related work last week, and added some new entries to the More...	NMRpipe Yahoo group news	News from other NMR forums	0	03-05-2011 02:44 AM
[NMRpipe Yahoo group] indirect referencing indirect referencing dear Frank, If at all possible in your sequence of priorities, would it be possible to implement the IUPAC approach in NMRPipe? It would be great if one could More...	NMRpipe Yahoo group news	News from other NMR forums	0	03-04-2011 02:12 AM
[NMR Geek blog] Chemical Shift Referencing Calculator Chemical Shift Referencing Calculator Below is the protocol I follow for chemical shift referencing (direct for 1H, and indirect for 13C and 15N). Actually I always have to look back and forth for referencing, so thought why not make a small script and put it on web so that the access becomes handy. !!! The referencing should be done Full story can be found on the NMR geek blog	nmrlearner	News from NMR blogs	0	08-22-2010 01:41 AM
[NMRpipe Yahoo group] Re: Deuterium referencing in conv.tcl Re: Deuterium referencing in conv.tcl Greetings all ... Alex is absolutely correct, and I get to wear the Deuterium Dunce Cap. We've updated and posted new versions of NMRPipe with this fix -- so, More...	nmrlearner	News from other NMR forums	0	08-18-2010 11:15 AM
[NMRpipe Yahoo group] Deuterium referencing in conv.tcl Deuterium referencing in conv.tcl Hello, This isn't of immediate relevance to me, but I am curious nonetheless. I was looking through conv.tcl to learn a bit of how the varian and bruker More...	nmrlearner	News from other NMR forums	0	08-18-2010 11:15 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off