BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from other NMR forums
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 11-23-2013, 04:05 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,732
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default How can I tell if and what kind of solvent suppression was used?

How can I tell if and what kind of solvent suppression was used?

I have some older 2D HSQC 1H-15N data that was run by a NMR tech. Is there a way I can tell what kind of solvent suppression was used by looking through the acquisition files? Like I know I can open them up as text documents and see a lot of the experimental parameters, but I don't know if solvent suppression is listed in one of those parameters.

Thanks! -Brian W.



Check if somebody has answered this question on NMRWiki QA forum
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[Question from NMRWiki Q&A forum] 1D NOESY with selective excitation and water suppression
1D NOESY with selective excitation and water suppression Hi, I am trying to collect 1D NOESY spectrum of a small protein in 90% H2O with selective excitation so I could follow a few NOEs without running a whole 2D experiment. Is there any sequence in Varian BioPack that I could use for that? I cannot achieve water suppression with the standard 'Noesy1D' sequence and all the other seem to not allow to selectively irradiate only one peak. Maybe it is just a matter of right parameters but I don't know how to set them properly - if so I will appreciate any advice. Thanks
nmrlearner News from other NMR forums 0 09-11-2013 09:15 PM
[Question from NMRWiki Q&A forum] WEFT water suppression on Varian?
WEFT water suppression on Varian? I am working with carbohydrates and in 1D NMR we have anomeric protons very close to the HOD peak, sometimes even right under there. In the lab where I used to work we had a bruker machine with an adapted WEFT pulse (described by Hard et al, 1995), which basically does a 180 degree pulse on the HOD, followed by a HS pulse of 50 usec, d1 times to have 0 magnetization on HOD, then a detection pulse. Since the HOD relaxes much slower than the glycan H-C protons you get about 80% signal on nearby glycan protons and your HOD is usually nearly gone. Glycan...
nmrlearner News from other NMR forums 0 04-11-2013 09:27 PM
Simultaneous convection compensation and solvent suppression in biomolecular NMR diffusion experiments
Simultaneous convection compensation and solvent suppression in biomolecular NMR diffusion experiments Abstract Thermal convection and high intensity solvent resonances can significantly hamper diffusion estimates in pulsed gradient spin-echo nuclear magnetic resonance diffusion experiments on biomolecule samples. To overcome these two problems, a new double functional NMR diffusion sequence, double echo PGSTE-WATERGATE, is presented. The new sequence provides excellent convection compensation and solvent suppression (with a suppression factor in excess of at least 105 in a single scan)...
nmrlearner Journal club 0 01-09-2011 12:46 PM
[NMR paper] Close encounters of the transient kind: protein interactions in the photosynthetic re
Close encounters of the transient kind: protein interactions in the photosynthetic redox chain investigated by NMR spectroscopy. Related Articles Close encounters of the transient kind: protein interactions in the photosynthetic redox chain investigated by NMR spectroscopy. Acc Chem Res. 2003 Oct;36(10):723-30 Authors: Crowley PB, Ubbink M Plastocyanin and cytochrome c(6) function as electron shuttles between cytochrome f and photosystem I in the photosynthetic redox chain. To transfer electrons the partners form transient complexes, which are...
nmrlearner Journal club 0 11-24-2010 09:16 PM
[U. of Ottawa NMR Facility Blog] Background Suppression in Liquids
Background Suppression in Liquids High resolution NMR probes for liquids may contain parts near the coil consiting of the nuclei being observed. The parts give rise to background signals which can severely affect the NMR data. When observing11B, there is a background signal from boron containing parts near the coil and also the borosilicate glass in the NMR tube containing the sample. Cory and Ritchey* introduced a very simple, clever method to suppress background signals in 1988. Their method uses a composite pulse, consisting of a 90° and two 180° pulses with appropriate phase...
nmrlearner News from NMR blogs 0 08-21-2010 08:15 PM
[U. of Ottawa NMR Facility Blog] Hahn Echo for 11B Background Suppression in Solids
Hahn Echo for 11B Background Suppression in Solids Solids NMR probes often contain boron rich parts near the coil in which the sample resides. Boron nitride, in particular, is a material very commonly used. This can be very problematic if one wishes to collect 11B NMR data, in that a strong background signal may be observed. Even though these parts are not directly inside the coil with the sample, they do experience a small amount of rf from the coil and the coil does detect a 11B NMR signal from them. One simple way to avoid this problem is to use a Hahn echo to observe the 11B spectrum....
nmrlearner News from NMR blogs 0 08-21-2010 08:15 PM
[Stan NMR blog] Suppression of receiver recovery time in NMR
Suppression of receiver recovery time in NMR Extention of the classical Lowe-Tarr circuit More...
nmrlearner News from NMR blogs 0 08-21-2010 06:14 PM
Solvent signal suppression in NMR
Solvent signal suppression in NMR Publication year: 2010 Source: Progress in Nuclear Magnetic Resonance Spectroscopy, In Press, Accepted Manuscript, Available online 25 January 2010</br> Gang, Zheng , William S., Price</br> More...
nmrlearner Journal club 0 08-16-2010 03:50 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 04:24 AM.


Map