CNS Yahoo group First contours of a vision for the future of validation at the PDB

		BioNMR > NMR community > News from other NMR forums
[CNS Yahoo group] First contours of a vision for the future of validation at the PDB

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

10-14-2011, 07:34 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,732

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

First contours of a vision for the future of validation at the PDB

First contours of a vision for the future of validation at the PDB

(Posted on behalf of wwPDB) The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is pleased to direct PDB depositors and users to the recommendations of the

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[CNS Yahoo group] First contours of a vision for the future of validation at the PDB First contours of a vision for the future of validation at the PDB (Posted on behalf of wwPDB) The Worldwide Protein Data Bank (wwPDB; wwpdb.org) is pleased to direct PDB depositors and users to the recommendations of the More...	nmrlearner	News from other NMR forums	0	11-09-2011 06:44 AM
[NMR software blog] Glassy Contours Glassy Contours http://4.bp.blogspot.com/-qf-1XdTAXWM/TiVve6DhF2I/AAAAAAAAAXs/mMPaNLPDhM0/s400/glassy.jpeg This is a new concept in the art of plotting. Only one color is used for positive peaks and another color for negative peaks. The difference among the levels is a different value of the alpha channel. Click the picture to enlarge. This option is featured in iNMR reader 4.1.5 and iNMR 4.1.6.https://blogger.googleusercontent.com/tracker/36798768-407001919601364208?l=nmr-software.blogspot.com Source: NMR Software blog	nmrlearner	News from NMR blogs	0	07-19-2011 10:00 PM
[Stan NMR blog] Is there a future for Quantum Computing? Is there a future for Quantum Computing? A personal view of the of the Quantum Computation frenzy, with an eye on MR Source: Stan blog library	nmrlearner	News from NMR blogs	0	01-12-2011 01:32 AM
[NMR tweet] RT @IOP_NANO: Force-detected nuclear magnetic resonance: recent advances and future c RT @IOP_NANO: Force-detected nuclear magnetic resonance: recent advances and future challenges http://bit.ly/db9hhF #nanotechnology Published by NJPhysics (NJP) on 2010-11-11T22:29:45Z Source: Twitter	nmrlearner	Twitter NMR	0	11-11-2010 11:11 PM
[BMNRC community] The future of NMR The future of NMR With the time needed to solve structures by NMR spectroscopy reduced to weeks or even days, how much better can… Read the rest Go to BMNRC community to find more info about this topic.	nmrlearner	News from other NMR forums	0	08-27-2010 07:58 PM
[Stan NMR blog] Is there a future for Quantum Computing? Is there a future for Quantum Computing? A personal view of the of the Quantum Computation frenzy, with an eye on MR More...	nmrlearner	News from NMR blogs	0	08-21-2010 05:42 PM
The future of NMR The future of NMR With the time needed to solve structures by NMR spectroscopy reduced to weeks or even days, how much better can it get? More...	nmrlearner	Online News	0	08-19-2010 01:47 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off