NMR Sparky Yahoo group convert spectrum of sparky to xeasy

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[NMR Sparky Yahoo group] convert spectrum of sparky to xeasy

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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08-21-2010, 03:03 PM

nmrlearner

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convert spectrum of sparky to xeasy

convert spectrum of sparky to xeasy

... Hi Yibing, I don't know how to convert from Sparky spectrum format to XEasy format. You can dump the Sparky spectrum data values in binary floating point

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[NMR Sparky Yahoo group] Re: create Sparky peak list from XEASY xxx.prot and xxx.peaks files Re: create Sparky peak list from XEASY xxx.prot and xxx.peaks files Should be able to just convert the XEASY peak list to SPARKY using: http://www.cerm.unifi.it/Sparky/extension.html then combine the files as a simple text More...	nmrlearner	News from other NMR forums	0	05-16-2011 08:22 AM
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[NMR Sparky Yahoo group] Re: convert spectrum of sparky to xeasy Re: convert spectrum of sparky to xeasy Try this suite of tools I have used it successfully to convert between many different formats. Look for ucsf2pipe. More...	nmrlearner	News from other NMR forums	0	10-06-2010 02:23 PM
[NMR Sparky Yahoo group] Re: convert spectrum of sparky to xeasy Re: convert spectrum of sparky to xeasy Hi Yibing, Funny that this should come up... I just saw a poster at the ICMRBS in Australia last week about precisely this problem. Michael Gryk's lab at More...	nmrlearner	News from other NMR forums	0	10-06-2010 02:23 PM
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[NMR Sparky Yahoo group] Re: save,convert sparky spectrum to word or powerpoint Re: save,convert sparky spectrum to word or powerpoint Thanks a lot for the help. Patrick ________________________________ From: Joshua Ward To: "nmr_sparky@yahoogroups.com" More...	nmrlearner	News from other NMR forums	0	08-21-2010 03:03 PM

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