BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 06-04-2014, 03:22 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,775
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Static (1)H dynamic nuclear polarization with the biradical TOTAPOL: a transition between the solid effect and the cross effect

From The DNP-NMR Blog:

Static (1)H dynamic nuclear polarization with the biradical TOTAPOL: a transition between the solid effect and the cross effect


Shimon, D., et al., Static (1)H dynamic nuclear polarization with the biradical TOTAPOL: a transition between the solid effect and the cross effect. Phys Chem Chem Phys, 2014. 16(14): p. 6687-99.


http://www.ncbi.nlm.nih.gov/pubmed/24585094


To study the solid state (1)H-DNP mechanism of the biradical TOTAPOL under static conditions the frequency swept DNP enhancement spectra of samples containing 20 mM and 5 mM TOTAPOL were measured as a function of MW irradiation time and temperature. We observed that under static DNP conditions the biradical TOTAPOL behaves similar to the monoradical TEMPOL, in contrast to MAS DNP where TOTAPOL is considerably more effective. As previously done for TEMPOL, the TOTAPOL DNP spectra were analyzed taking a superposition of a basic SE-DNP lineshape and a basic CE-DNP lineshape with different amplitudes. The analysis of the steady state DNP spectra showed that the SE was dominant in the 6-10 K range and the CE was dominant above 10 K. DNP spectra obtained as a function of MW irradiation time allowed resolving the individual SE and CE buildup times. At low temperatures the SE buildup time was faster than the CE buildup time and at all temperatures the CE buildup time was close to the nuclear spin-lattice relaxation time, T1n. Polarization calculations involving nuclear spin-diffusion for a model system of one electron and many nuclei suggested that the shortening of the T1n for increasing temperatures is the reason why the SE contribution to the overall enhancement was reduced.


Go to The DNP-NMR Blog for more info.
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Observation of strongly forbidden solid effect dynamic nuclear polarization transitions via electron-electron double resonance detected NMR
From The DNP-NMR Blog: Observation of strongly forbidden solid effect dynamic nuclear polarization transitions via electron-electron double resonance detected NMR Smith, A.A., et al., Observation of strongly forbidden solid effect dynamic nuclear polarization transitions via electron-electron double resonance detected NMR. J Chem Phys, 2013. 139(21): p. 214201. http://www.ncbi.nlm.nih.gov/pubmed/24320373
nmrlearner News from NMR blogs 0 05-06-2014 01:57 AM
The Role of the Interaction Frame in the Theoretical Description of Solid Effect Dynamic Nuclear Polarization
From The DNP-NMR Blog: The Role of the Interaction Frame in the Theoretical Description of Solid Effect Dynamic Nuclear Polarization Kwiatkowski, G., A. Karabanov, and W. Köckenberger, The Role of the Interaction Frame in the Theoretical Description of Solid Effect Dynamic Nuclear Polarization. Israel Journal of Chemistry, 2014. 54(1-2): p. 184-195. http://dx.doi.org/10.1002/ijch.201300125
nmrlearner News from NMR blogs 0 04-30-2014 02:21 PM
[NMR paper] Dynamic nuclear polarization-enhanced 13C NMR spectroscopy of static biological solids.
Dynamic nuclear polarization-enhanced 13C NMR spectroscopy of static biological solids. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles Dynamic nuclear polarization-enhanced 13C NMR spectroscopy of static biological solids. J Magn Reson. 2013 Jun;231:5-14 Authors: Potapov A, Yau WM, Tycko R Abstract We explore the possibility of using dynamic nuclear polarization (DNP) to enhance signals in structural studies of biological solids by solid state NMR...
nmrlearner Journal club 0 01-11-2014 07:50 PM
Quantitative cw Overhauser effect dynamic nuclear polarization for the analysis of local water dynamics
From The DNP-NMR Blog: Quantitative cw Overhauser effect dynamic nuclear polarization for the analysis of local water dynamics Franck, J.M., et al., Quantitative cw Overhauser effect dynamic nuclear polarization for the analysis of local water dynamics. Prog Nucl Magn Reson Spectrosc, 2013. 74(0): p. 33-56. http://www.ncbi.nlm.nih.gov/pubmed/24083461
nmrlearner News from NMR blogs 0 11-21-2013 01:14 AM
Theoretical Aspects of Dynamic Nuclear Polarization in the Solid State: The Influence of High Radical Concentrations on the Solid Effect and Cross Effect Mechanisms
From The DNP-NMR Blog: Theoretical Aspects of Dynamic Nuclear Polarization in the Solid State: The Influence of High Radical Concentrations on the Solid Effect and Cross Effect Mechanisms Hovav, Y., et al., Theoretical Aspects of Dynamic Nuclear Polarization in the Solid State: The Influence of High Radical Concentrations on the Solid Effect and Cross Effect Mechanisms. Appl. Magn. Reson., 2012. 43(1-2): p. 21-41. http://dx.doi.org/10.1007/s00723-012-0359-0
nmrlearner News from NMR blogs 0 11-21-2013 01:14 AM
Dynamic nuclear polarization-enhanced 1H–13C double resonance NMR in static samples below 20 K
From The DNP-NMR Blog: Dynamic nuclear polarization-enhanced 1H–13C double resonance NMR in static samples below 20 K I think I missed this one from 2012 Potapov, A., et al., Dynamic nuclear polarization-enhanced 1H–13C double resonance NMR in static samples below 20 K. J. Magn. Reson., 2012. 221(0): p. 32-40.
nmrlearner News from NMR blogs 0 11-21-2013 01:14 AM
The interplay between the solid effect and the cross effect mechanisms in solid state 13C DNP at 95 GHz using trityl radicals
From The DNP-NMR Blog: The interplay between the solid effect and the cross effect mechanisms in solid state 13C DNP at 95 GHz using trityl radicals Banerjee, D., et al., The interplay between the solid effect and the cross effect mechanisms in solid state 13C DNP at 95 GHz using trityl radicals. J. Magn. Reson., 2013. 230(0): p. 212-219. http://dx.doi.org/10.1016/j.jmr.2013.02.010
nmrlearner News from NMR blogs 0 05-07-2013 12:31 AM
Dynamic nuclear polarization-enhanced 13C NMR spectroscopy of static biological solids
Dynamic nuclear polarization-enhanced 13C NMR spectroscopy of static biological solids Available online 27 February 2013 Publication year: 2013 Source:Journal of Magnetic Resonance</br> </br> We explore the possibility of using dynamic nuclear polarization (DNP) to enhance signals in structural studies of biological solids by solid state NMR without sample spinning. Specifically, we use 2D 13C-13C exchange spectroscopy to probe the peptide backbone torsion angles (?,?) in a series of selectively 13C-labeled 40-residue ?-amyloid (A ?1-40) samples, in both fibrillar and...
nmrlearner Journal club 0 02-28-2013 07:57 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 01:23 PM.


Map