We present a pulsed dynamic nuclear polarization (DNP) study using a ramped-amplitude nuclear orientation via electron spin locking (RA-NOVEL) sequence that utilizes a fast arbitrary waveform generator (AWG) to modulate the microwave pulses together with samples doped with narrow-line radicals such as 1,3-bisdiphenylene-2-phenylallyl (BDPA), sulfonated-BDPA (SA-BDPA), and trityl- OX063. Similar to ramped-amplitude cross polarization in solid-state nuclear magnetic resonance, RA-NOVEL improves the DNP efficiency by a factor of up to 1.6 compared to constant-amplitude NOVEL (CA-NOVEL) but requires a longer mixing time. For example, at mix = 8 s, the DNP efficiency reaches a plateau at a ramp amplitude of 20 MHz for both SA-BDPA and trityl-OX063, regardless of the ramp profile (linear vs. tangent). At shorter mixing times (mix = 0.8 s), we found that the tangent ramp is superior to its linear counterpart and in both cases there exists an optimum ramp size and therefore ramp rate. Our results suggest that RA-NOVEL should be used instead of CA-NOVEL as long as the electronic spin lattice relaxation T1e is sufficiently long and/or the duty cycle of the microwave amplifier is not exceeded. To the best of our knowledge, this is the first example of a time domain DNP experiment that utilizes modulated microwave pulses. Our results also suggest that a precise modulation of the microwave pulses can play an important role in optimizing the efficiency of pulsed DNP experiments and an AWG is an elegant instrumental solution for this purpose.
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[NMR paper] Handling the influence of chemical shift in amplitude-modulated heteronuclear dipolar recoupling solid-state NMR.
Handling the influence of chemical shift in amplitude-modulated heteronuclear dipolar recoupling solid-state NMR.
http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/https:--publishing.aip.org-sites-default-files-aippub-NLM-scitationblue.jpg Related Articles Handling the influence of chemical shift in amplitude-modulated heteronuclear dipolar recoupling solid-state NMR.
J Chem Phys. 2016 Sep 07;145(9):094202
Authors: Basse K, Shankar R, Bjerring M, Vosegaard T, Nielsen NC, Nielsen AB
Abstract
We present a...
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08-18-2017 03:56 AM
[NMR paper] Solid-state NMR provides evidence for small-amplitude slow domain motions in a multi-spanning transmembrane ?-helical protein.
Solid-state NMR provides evidence for small-amplitude slow domain motions in a multi-spanning transmembrane ?-helical protein.
Solid-state NMR provides evidence for small-amplitude slow domain motions in a multi-spanning transmembrane ?-helical protein.
J Am Chem Soc. 2017 Jun 14;
Authors: Good D, Pham C, Jagas J, Lewandowski JR, Ladizhansky V
Abstract
Proteins are dynamic entities and populate ensembles of conformations. Transitions between states within a conformational ensemble occur over a broad spectrum of amplitude...
[NMR] PhD position #DNPNMR
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PhD position #DNPNMR
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A PhD studentship supported by the Marie Curie Actions-COFUND is available under the joint supervision of Dr. Armand MASION (CEREGE Laboratory www.cerege.fr) and Prof. Stéphane VIEL (Radical Chemistry Institute http://icr-amu.cnrs.fr) at Aix-Marseille University (located in the southern-east part of France).
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05-30-2016 12:56 AM
[NMR] PhD fellowship #DNPNMR
From The DNP-NMR Blog:
PhD fellowship #DNPNMR
From the Ampere Magnetic Resonance List
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05-02-2016 11:33 AM
[Question from NMRWiki Q&A forum] Amplitude problems when comparing 'popt' experiments in Bruker (Topspin)
Amplitude problems when comparing 'popt' experiments in Bruker (Topspin)
Hi all,My question is about the Multiple Display (.md) function on TopSpin (Bruker AVIII).I did some 'popt' ( parameter optimization ) experiments, and the optimization is stored in PROCNO 999.
My problem is when I tried to compare two different experiments of 'popt optimization', using the comand Multiple Display. When I do this for two procno 999 with another procno 999 of other experiment , I obtain a visualization, like showed above:
popt 1 Amplitude: _ | _ | _ | _ | _ | _ | _
popt 2 Amplitude: _ | _ | _...
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11-11-2015 02:40 PM
[NMR paper] Vanishing amplitude of backbone dynamics causes a true protein dynamical transition: H2 NMR studies on perdeuterated C-phycocyanin.
Vanishing amplitude of backbone dynamics causes a true protein dynamical transition: H2 NMR studies on perdeuterated C-phycocyanin.
Vanishing amplitude of backbone dynamics causes a true protein dynamical transition: H2 NMR studies on perdeuterated C-phycocyanin.
Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Mar;89(3-1):032710
Authors: Kämpf K, Kremmling B, Vogel M
Abstract
Using a combination of H2 nuclear magnetic resonance (NMR) methods, we study internal rotational dynamics of the perdeuterated protein C-phycocyanin...
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04-16-2014 11:07 AM
Broadband homonuclear TOCSY with amplitude and phase-modulated RF mixing schemes
Broadband homonuclear TOCSY with amplitude and phase-modulated RF mixing schemes
Anika Kirschstein, Christian Herbst, Kerstin Riedel, Michela Carella, Jörg Leppert, Oliver Ohlenschläger, Matthias Görlach and Ramadurai Ramachandran
Journal of Biomolecular NMR; 2008; 40(4); pp 227-237
Abstract:
We have explored the design of broadband scalar coupling mediated 13C–13C and cross-relaxation suppressed 1H–1H TOCSY sequences employing phase/amplitude modulated inversion pulses. Considering a variety of supercycles, pulsewidths and a RF field strength of 10 kHz, the Fourier coefficients...