BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 04-07-2014, 06:59 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,777
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Protein folding studied by dissolution dynamic nuclear polarization

From The DNP-NMR Blog:

Protein folding studied by dissolution dynamic nuclear polarization


Chen, H.Y., M. Ragavan, and C. Hilty, Protein folding studied by dissolution dynamic nuclear polarization. Angew Chem Int Ed Engl, 2013. 52(35): p. 9192-5.


http://www.ncbi.nlm.nih.gov/pubmed/23857756


Protein folding occurs on a timescale that is not directly observable with most traditional nuclear magnetic resonance (NMR) spectroscopy methods.[1, 2] The insights into this complex process that can potentially be gained from the high site resolution of NMR has led to developments such as stopped-flow NMR,[3] incorporation of specific isotope labels,[4] and pulse sequences tailored for rapid data acquisition.[5] Hyperpolarization, the generation of a non-equilibrium spin state, shows significant promise to enhance the sensitivity and, by removing the need for signal averaging, dramatically decrease signal acquisition time.[6, 7] For the study of protein folding, chemically induced dynamic nuclear polarization (CIDNP) has been used to hyperpolarize tryptophan residues that undergo a cyclic reaction with a photosensitizer.[8] A different technique, dynamic nuclear polarization (DNP),[9] hyperpolarizes nuclei throughout a molecule via an admixed stable free radical. Combined with solid state NMR, DNP provides unique information on protein structure.[10] Using dissolution DNP,[11] NMR in the liquid state would be sensitive to structural changes across the entire macromolecule during the folding process. Liquid-state NMR signals of a DNP hyperpolarized, denatured protein, the ribosomal protein L23,[12, 13] have recently been observed.[14]


Go to The DNP-NMR Blog for more info.
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Hyperpolarization of deuterated metabolites via remote cross-polarization and dissolution dynamic nuclear polarization
From The DNP-NMR Blog: Hyperpolarization of deuterated metabolites via remote cross-polarization and dissolution dynamic nuclear polarization Vuichoud, B., et al., Hyperpolarization of deuterated metabolites via remote cross-polarization and dissolution dynamic nuclear polarization. J Phys Chem B, 2014. 118(5): p. 1411-5. http://www.ncbi.nlm.nih.gov/pubmed/24397585
nmrlearner News from NMR blogs 0 04-02-2014 11:54 PM
Solid-Phase Polarization Matrixes for Dynamic Nuclear Polarization from Homogeneously Distributed Radicals in Mesostructured Hybrid Silica Materials
From The DNP-NMR Blog: Solid-Phase Polarization Matrixes for Dynamic Nuclear Polarization from Homogeneously Distributed Radicals in Mesostructured Hybrid Silica Materials Gajan, D., et al., Solid-Phase Polarization Matrixes for Dynamic Nuclear Polarization from Homogeneously Distributed Radicals in Mesostructured Hybrid Silica Materials. J. Am. Chem. Soc., 2013. 135(41): p. 15459-15466. http://dx.doi.org/10.1021/ja405822h
nmrlearner News from NMR blogs 0 12-30-2013 03:15 PM
Formulation and utilization of choline based samples for dissolution dynamic nuclear polarization
From The DNP-NMR Blog: Formulation and utilization of choline based samples for dissolution dynamic nuclear polarization Bowen, S. and J.H. Ardenkjaer-Larsen, Formulation and utilization of choline based samples for dissolution dynamic nuclear polarization. J Magn Reson, 2013. 236(0): p. 26-30. http://www.ncbi.nlm.nih.gov/pubmed/24036470
nmrlearner News from NMR blogs 0 12-02-2013 11:48 PM
Over 35% liquid-state (13)C polarization obtained via dissolution dynamic nuclear polarization at 7 T and 1 K using ubiquitous nitroxyl radicals
From The DNP-NMR Blog: Over 35% liquid-state (13)C polarization obtained via dissolution dynamic nuclear polarization at 7 T and 1 K using ubiquitous nitroxyl radicals Cheng, T., et al., Over 35% liquid-state (13)C polarization obtained via dissolution dynamic nuclear polarization at 7 T and 1 K using ubiquitous nitroxyl radicals. Phys Chem Chem Phys, 2013. 15(48): p. 20819-22. http://www.ncbi.nlm.nih.gov/pubmed/24217111
nmrlearner News from NMR blogs 0 11-29-2013 09:58 PM
Cross Polarization for Dissolution Dynamic Nuclear Polarization Experiments at Readily Accessible Temperatures 1.2*
From The DNP-NMR Blog: Cross Polarization for Dissolution Dynamic Nuclear Polarization Experiments at Readily Accessible Temperatures 1.2*
nmrlearner News from NMR blogs 0 11-21-2013 01:14 AM
REMINDER: Course on "Dissolution Dynamic Nuclear Polarization" November 13-15, 2013 at EPFL, Switzerland
From The DNP-NMR Blog: REMINDER: Course on "Dissolution Dynamic Nuclear Polarization" November 13-15, 2013 at EPFL, Switzerland This is from the Ampere Magnetic Resonance List: We would like to announce a three-day course for PhD students and Post-Docs on
nmrlearner News from NMR blogs 0 11-21-2013 01:14 AM
[NMR] Course on "Dissolution Dynamic Nuclear Polarization" November 13-15, 2013 at EPFL, Switzerland
From The DNP-NMR Blog: Course on "Dissolution Dynamic Nuclear Polarization" November 13-15, 2013 at EPFL, Switzerland From the AMPERE list: We would like to announce a three-day course for PhD students and Post-Docs on
nmrlearner News from NMR blogs 0 09-05-2013 01:07 PM
Neurotoxin II Bound to Acetylcholine Receptors in Native Membranes Studied by Dynamic Nuclear Polarization NMR
Neurotoxin II Bound to Acetylcholine Receptors in Native Membranes Studied by Dynamic Nuclear Polarization NMR Arne H. Linden, Sascha Lange, W. Trent Franks, U?mit Akbey, Edgar Specker, Barth-Jan van Rossum and Hartmut Oschkinat http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja206999c/aop/images/medium/ja-2011-06999c_0003.gif Journal of the American Chemical Society DOI: 10.1021/ja206999c http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/jacsat/~4/4d1LYPHtCFw
nmrlearner Journal club 0 11-11-2011 08:26 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 01:31 PM.


Map