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[NMR900 blog] NSERC 2013 Competition Results

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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07-12-2013, 04:06 AM

nmrlearner

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NSERC 2013 Competition Results

NSERC 2013 Competition Results

Discovery Grants [NSERC]

Richard Epand (McMaster) Membrane Interactions and Diacylglycerol Kinases

Michael Gerken (Lethbridge) Sulfur in Inorganic Fluorine Chemistry and the Development of a New Class of Weakly Coordinating Anions

Michel Lafleur (Montréal) Characterizing, Understanding and Exploiting lipid-lipid interactions

Isabelle Marcotte (Québec à Montréal) Nuclear magnetic resonance study of membrane interactions: from intact microorganisms to model membranes

Igor Mastikhin (New Brunswick) Magnetic Resonance Imaging of two-phase systems

Lawrence McIntosh (UBC) Glycosidases and Glycosyl Transferases

Scott Prosser (Toronto) Protein Functional Dynamics and Energy Landscapes

Giles Santyr (Western) Novel Approaches for Hyperpolarized Xenon-129 Magnetic Resonance Imagin

Abdelhamid Sayari (Ottawa) Nanostructured Materials for Separation and Catalysis

Simon Sharpe (Toronto) Structure, assembly, and biological activity of amyloid peptides and proteins

George Shimizu (Calgary) Synthesis and properties of metal organic frameworks

Roderick Wasylishen (Alberta) Magnetic Resonance Studies of Molecular Structure and Dynamics

Anand Yethiraj (Memorial) Tunable hydrodynamics and restricted motions: probing dynamics and the mechanisms of self-organization in soft matter

Tom Ziegler (Calgary) The development of new density functional based methods and their application to catalysis

Josef Zwanziger (Dalhousie) Structure/Property Relationships in Inorganic Glasses

Discovery Accelerator Supplement $120,000 over three years

Scott Prosser (Toronto) Protein Functional Dynamics and Energy Landscapes

Research Tools and Instruments (RTI)

Kim Baines (Western) Replacement Probe for Inova 600 MHz NMR Spectrometer

Steve Bourgault, Isabelle Marcotte and Borhane Annabi (Québec à Montréal) A protein purification platform for biochemistry and structural biology research

Richard Epand (McMaster) Isothermal titration calorimeter

Scott Prosser (Toronto) Essential Equipment for Membrane Protein Preparation and Purification

Read complete story on NMR900 blog

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