Stan NMR blog Mathematical Means and Averages: Basic Properties

		BioNMR > NMR community > News from NMR blogs
[Stan NMR blog] Mathematical Means and Averages: Basic Properties

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-21-2010, 06:14 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Mathematical Means and Averages: Basic Properties

Mathematical Means and Averages: Basic Properties

A primer with rigorous definitions of mathematical means and averages and their properties.

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR tweet] @CharlesTrippy NMR means: Nuclear Magnetic Resonance @CharlesTrippy NMR means: Nuclear Magnetic Resonance Published by TwistedEnemy (Austin May) on 2011-05-11T19:53:45Z Source: Twitter	nmrlearner	Twitter NMR	0	05-11-2011 08:53 PM
[Question from NMRWiki Q&A forum] Software to create shaped pulse files from mathematical equation? Software to create shaped pulse files from mathematical equation? I would like to create working shaped pulse files in one step starting from mathematical expressions - one for amplitude, another for phase vs. time. Does anyone know software that can do it? Check if somebody has answered this question on NMRWiki QA forum	nmrlearner	News from other NMR forums	0	04-12-2011 01:10 PM
[NMR paper] Mathematical aspects of protein structure determination with NMR orientational restra Mathematical aspects of protein structure determination with NMR orientational restraints. Related Articles Mathematical aspects of protein structure determination with NMR orientational restraints. Bull Math Biol. 2004 Nov;66(6):1705-30 Authors: Quine JR, Cross TA, Chapman MS, Bertram R The field of structural biology is becoming increasingly important as new technological developments facilitate the collection of data on the atomic structures of proteins and nucleic acids. The solid-state NMR method is a relatively new biophysical technique...	nmrlearner	Journal club	0	11-24-2010 10:03 PM
[Question from NMRWiki Q&A forum] Correct mathematical formulas of the important window functions Correct mathematical formulas of the important window functions Hi, regarding my C++/Qt NMR processing application (see http://qa.nmrwiki.org/question/149/problem-reading-and-transforming-vendor-data-using-cqt or http://cutenmr.sourceforge.net/) I have a question concerning the window functions. I did research in the literature but could not find the "correct" mathematical formulas of the important window functions (exponential, gaussian, sine, sine squared, TRAF). For the gaussian function I found: exp(-(t*LB)^2)	nmrlearner	News from other NMR forums	0	09-19-2010 06:03 PM
[Stan NMR blog] Mathematical Means and Averages: Hermean, alias Generalized Logarithmic Mean Mathematical Means and Averages: Hermean, alias Generalized Logarithmic Mean The limit of generalized Heronian means Her(k,a): existence and a closed formula. More...	nmrlearner	News from NMR blogs	0	08-21-2010 06:14 PM
[Stan NMR blog] Generalized Heronian means III Generalized Heronian means III Proof that no generalized Heronian mean is ever smaller than geometric mean. More...	nmrlearner	News from NMR blogs	0	08-21-2010 06:14 PM
[Stan NMR blog] Generalized Heronian means II Generalized Heronian means II Proofs of Heronian means inequalities for two special cases. More...	nmrlearner	News from NMR blogs	0	08-21-2010 06:14 PM
[Stan NMR blog] Mathematical Means and Averages: Generalized Heronian means Mathematical Means and Averages: Generalized Heronian means A sweeping generalization of the Heronian mean to a parametrized family of means. More...	nmrlearner	News from NMR blogs	0	08-21-2010 06:14 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off