ICMRBS: Emerging MR Webinar, June 18

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ICMRBS: Emerging MR Webinar, June 18

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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06-17-2020, 08:00 AM

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ICMRBS: Emerging MR Webinar, June 18

From The DNP-NMR Blog:

ICMRBS: Emerging MR Webinar, June 18

Dear Colleagues:

In lieu of an in-person meeting this summer, ICMRBS is supporting a weekly webinar series in biological magnetic resonance (http://emergingmr.org) with weekly talks on Thursday afternoons (Europe) / mornings (N. America). For Thursday, June 18:

Tuo Wang (Louisiana State University)
Elucidation of carbohydrate structure in plant biomass and fungal pathogens using solid-state NMR and DNP methods

Rina Rosenzweig (Weizmann Institute of Science)
Molecular Chaperones in Protein Disaggregation - What we can learn from NMR

June 18: 7 a.m. PST / 10 a.m. EST / 4 p.m. CEST / 7.30 p.m IST / 10 p.m. CST
https://zoom.us/j/91219438807?pwd=NH...tJU2t0dlBEdz09
Webinar-ID: 912 1943 8807 Password: bioNMR2020

Prior talks are posted to the ICMRBS' YouTube channel ca. 1 week post presentation (https://www.youtube.com/channel/UCsx...EeBrfo-4d5w33Q).

Please spread the word and share this email with your colleagues! If you've received this email indirectly, please email kgardner@gc.cuny.edu to be added to the mailing list.

Best regards,
Kevin Gardner on behalf of ICMRBS Council

Go to The DNP-NMR Blog for more info.

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