König, Anna, Daniel Schölzel, Boran Uluca, Thibault Viennet, Ümit Akbey, and Henrike Heise. “Hyperpolarized MAS NMR of Unfolded and Misfolded Proteins.” Solid State Nuclear Magnetic Resonance 98 (April 2019): 1–11.
In this article we give an overview over the use of DNP-enhanced solid-state NMR spectroscopy for the investigation of unfolded, disordered and misfolded proteins. We first provide an overview over studies in which DNP spectroscopy has successfully been applied for the structural investigation of well-folded amyloid fibrils formed by short peptides as well as full-length proteins. Sample cooling to cryogenic temperatures often leads to severe linebroadening of resonance signals and thus a loss in resolution. However, inhomogeneous linebroadening at low temperatures provides valuable information about residual dynamics and flexibility in proteins, and, in combination with appropriate selective isotope labeling techniques, inhomogeneous line-widths in disordered proteins or protein regions may be exploited for evaluation of conformational ensembles. In the last paragraph we highlight some recent studies where DNP-enhanced MAS-NMR-spectroscopy was applied to the study of disordered proteins/protein regions and inhomogeneous sample preparations.
Absolute 1H polarization measurement with a spin-correlated component of magnetization by hyperpolarized MAS-DNP solid-state NMR #DNPNMR
From The DNP-NMR Blog:
Absolute 1H polarization measurement with a spin-correlated component of magnetization by hyperpolarized MAS-DNP solid-state NMR #DNPNMR
To my knowledge, this is one of the few methods that allows to measure the absolute polarization of a spin ensemble. Often the on/off signal ratio is used to characterize the efficiency of the DNP - a method that does not take depolarization effects into account. The method is related to the SPY-MR method to measure absolute spin polarization in dissolution DNP experiments.
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03-24-2019 10:41 PM
Photogenerated Radical in Phenylglyoxylic Acid for in Vivo Hyperpolarized 13C MR with Photosensitive Metabolic Substrates #DNPNMR
From The DNP-NMR Blog:
Photogenerated Radical in Phenylglyoxylic Acid for in Vivo Hyperpolarized 13C MR with Photosensitive Metabolic Substrates #DNPNMR
Marco-Rius, Irene, Tian Cheng, Adam P. Gaunt, Saket Patel, Felix Kreis, Andrea Capozzi, Alan J. Wright, Kevin M. Brindle, Olivier Ouari, and Arnaud Comment. “Photogenerated Radical in Phenylglyoxylic Acid for in Vivo Hyperpolarized 13 C MR with Photosensitive Metabolic Substrates.” Journal of the American Chemical Society 140, no. 43 (October 31, 2018): 14455–63.
https://doi.org/10.1021/jacs.8b09326.
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11-25-2018 06:02 AM
Transportable hyperpolarized metabolites #DNPNMR
From The DNP-NMR Blog:
Transportable hyperpolarized metabolites #DNPNMR
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This article describes an elegant way to increase the throughput of a hyperpolarizer by storing the hyperpolarized materials separated from the polarizing agents.
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10-12-2017 01:25 AM
Hyperpolarized Nanodiamond Surfaces #DNPNMR
From The DNP-NMR Blog:
Hyperpolarized Nanodiamond Surfaces #DNPNMR
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Rej, E., et al., Hyperpolarized Nanodiamond Surfaces. J Am Chem Soc, 2017. 139(1): p. 193-199.
https://www.ncbi.nlm.nih.gov/pubmed/28009158
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02-15-2017 03:40 PM
Constant-variable flip angles for hyperpolarized media MRI #DNPNMR
From The DNP-NMR Blog:
Constant-variable flip angles for hyperpolarized media MRI #DNPNMR
Deng, H., et al., Constant-variable flip angles for hyperpolarized media MRI. J. Magn. Reson., 2016. 263: p. 92-100.
http://www.sciencedirect.com/science/article/pii/S1090780716000203
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06-21-2016 01:09 AM
Pseudo-4D triple resonance experiments to resolve HN overlap in the backbone assignment of unfolded proteins
Pseudo-4D triple resonance experiments to resolve HN overlap in the backbone assignment of unfolded proteins
Abstract The solution NMR resonance assignment of the protein backbone is most commonly carried out using triple resonance experiments that involve 15N and 1HN resonances. The assignment becomes problematic when there is resonance overlap of 15Nâ??1HN cross peaks. For such residues, one cannot unambiguously link the â??leftâ?? side of the NH root to the â??rightâ?? side, and the residues associated with such overlapping HN resonances remain often unassigned. Here we present a...
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12-31-2010 08:38 PM
[NMR paper] Unfolded proteins and protein folding studied by NMR.
Unfolded proteins and protein folding studied by NMR.
Related Articles Unfolded proteins and protein folding studied by NMR.
Chem Rev. 2004 Aug;104(8):3607-22
Authors: Dyson HJ, Wright PE
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11-24-2010 10:01 PM
Theoretical framework for NMR residual dipolar couplings in unfolded proteins
Theoretical framework for NMR residual dipolar couplings in unfolded proteins
O. I. Obolensky, Kai Schlepckow, Harald Schwalbe and A. V. Solov’yov
Journal of Biomolecular NMR; 2007; 39(1) pp 1-16
Abstract:
A theoretical framework for the prediction of nuclear magnetic resonance (NMR) residual dipolar couplings (RDCs) in unfolded proteins under weakly aligning conditions is presented. The unfolded polypeptide chain is modeled as a random flight chain while the alignment medium is represented by a set of regularly arranged obstacles. For the case of bicelles oriented perpendicular to...