BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 04-19-2011, 02:44 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,700
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default FT NMR Spectra Without Pulses

FT NMR Spectra Without Pulses

An FT NMR spectrum is obtained by applying a pulse at the Larmor frequency to a sample in a magnetic field. The precession of the spins induces a voltage in the receiver coil which is recorded as a function of time. The Fourier transform of the time dependent signal is the NMR spectrum. What happens if you do not provide any pulses? You might think that you would not observe a signal - but this is not the case. Even without any pulses there is sufficient noise present to allow incoherent precession of the nuclear spins. This precession can be measured and indeed produce an NMR spectrum. This is demonstrated in the figure below. The bottom trace shows a conventional 300 MHz 1H NMR spectrum of ethyl acetate collected with one scan using a 30° pulse. The top trace was collected on the same sample by adding 256 single scan magnitude spectra using no pulses whatsoever. Although very weak, one can clearly see the NMR spectrum of ethyl acetate.







Source: University of Ottawa NMR Facility Blog
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Mathematical treatment of adiabatic fast passage pulses for the computation of nuclear spin relaxation rates in proteins with conformational exchange
Mathematical treatment of adiabatic fast passage pulses for the computation of nuclear spin relaxation rates in proteins with conformational exchange Abstract Although originally designed for broadband inversion and decoupling in NMR spectroscopy, recent methodological developments have introduced adiabatic fast passage (AFP) pulses into the field of protein dynamics. AFP pulses employ a frequency sweep, and have not only superior inversion properties with respect to offset effects, but they are also easily implemented into a pulse sequence. As magnetization is dragged from the +z to...
nmrlearner Journal club 0 09-30-2011 08:01 PM
[U. of Ottawa NMR Facility Blog] Probe Tuning and 90 Degree Pulses
Probe Tuning and 90 Degree Pulses In order to get meaningful results from multiple-pulse NMR pulse sequences, it is essential that the 90° and 180° pulses are calibrated at the power levels used in the sequences (see this post for example). The calibrations are usually done on a standard sample in a well tuned and matched probe. The calibrations are typically stored in a file which is called up when setting up particular NMR experiments. It is important to know that these calibrations are correct for the particular sample of interest only when the probe is well tuned and matched. For...
nmrlearner News from NMR blogs 0 09-16-2011 10:02 PM
[U. of Ottawa NMR Facility Blog] Shaped Pulses
Shaped Pulses Shaped rf pulses are used frequently in modern NMR experiments for selective excitation and more efficient inversion. The figure below shows some of the pulse shapes in the Bruker shape library measured with an oscilloscope on an AVANCE III console. Each 50.3 MHz rf pulse was 1 msec in duration and was measured at the output of the signal generation unit.http://2.bp.blogspot.com/--GjbnC0soco/TeU9TDXS7nI/AAAAAAAAA4c/Kt3DwPKLjx8/s400/shaped_pulses_scope.jpghttps://blogger.googleusercontent.com/tracker/3300702123878659843-4230712340261495616?l=u-of-o-nmr-facility.blogspot.com...
nmrlearner News from NMR blogs 0 05-31-2011 11:41 PM
[U. of Ottawa NMR Facility Blog] Excitation Profiles for Shaped Pulses
Excitation Profiles for Shaped Pulses Shaped pulses are very commonly used for selective excitation and nonselective inversion in a large number of NMR pulse sequences. The frequency domain excitation profile of a radio frequency pulse is the Fourier transform of the time dependent pulse shape and determines the width, uniformity and phase of the frequency spectrum excited. Since time and frequency are reciprocals of one another, short rf pulses have very wide excitation profiles and long rf pulses have very narrow selective excitation profiles. In a previous BLOG post the excitation...
nmrlearner News from NMR blogs 0 01-21-2011 03:31 AM
[NMR paper] Improved excitation pulse bandwidths using shaped pulses, with application to heteron
Improved excitation pulse bandwidths using shaped pulses, with application to heteronuclear half filters in macromolecular NMR. Related Articles Improved excitation pulse bandwidths using shaped pulses, with application to heteronuclear half filters in macromolecular NMR. J Magn Reson B. 1995 Jul;108(1):12-21 Authors: Hyre DE, Spicer LD The advantageous use of sinc-shaped pulses in heteronuclear half filters is explored for studying biological macromolecules. The typical square, or hard, pulse used in half-filter pulse sequences for...
nmrlearner Journal club 0 08-22-2010 03:41 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:39 PM.


Map