Stan NMR blog Fresh comments on the current state of NMR

		BioNMR > NMR community > News from NMR blogs
[Stan NMR blog] Fresh comments on the current state of NMR

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

01-17-2015, 04:14 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,776

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Fresh comments on the current state of NMR

Fresh comments on the current state of NMR

by Carlos Cobas, Craigh Butts, and Vanni Piccinotti.

Source: Stan blog library

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
NMR provides fresh atomic insights into a key protein that helps repair DNA - domain-B http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcR0Mltvd9GsxRRvDnDpEqMFte5l1ci0Ld0vmO63dNodRxq0cCs6z6HRl8dTVIcYU_uQZOii3j7M domain-B <img alt="" height="1" width="1" /> NMR provides fresh atomic insights into a key protein that helps repair DNA domain-B In a new study published in Nature Communications, two teams of scientists from Imperial College London and the University of Dundee have succeeded in visualising this flexible protein for the first time, using Nuclear Magnetic Resonance (NMR) ... NMR provides fresh atomic insights into a key protein that helps repair DNA -...	nmrlearner	Online News	0	07-03-2014 06:13 PM
NMR provides fresh atomic insights into a key protein that helps repair DNA - Imperial College London NMR provides fresh atomic insights into a key protein that helps repair DNA - Imperial College London <img alt="" height="1" width="1" /> NMR provides fresh atomic insights into a key protein that helps repair DNA Imperial College London Scientists have made an important advance in understanding how a protein that identifies and repairs cancerous cells operates. RNF4 is a type of regulatory protein that controls the function and fate of proteins in cells by chemically flagging them ... Read here	nmrlearner	Online News	0	06-27-2014 11:07 AM
[Stan NMR blog] Phononian Science: current state and perspectives Phononian Science: current state and perspectives A mildly speculative reflection for Physicists. Source: Stan blog library	nmrlearner	News from NMR blogs	0	10-22-2012 08:47 AM
[Stan NMR blog] Phononian Science: current state and perspectives Phononian Science: current state and perspectives A provocative single-page article. Source: Stan blog library	nmrlearner	News from NMR blogs	0	10-21-2012 08:23 PM
Current applications of 19F NMR to studies of protein structure and dynamics Current applications of 19F NMR to studies of protein structure and dynamics Publication year: 2012 Source:Progress in Nuclear Magnetic Resonance Spectroscopy, Volume 62</br> Julianne L. Kitevski-LeBlanc, R. Scott Prosser</br> </br> </br></br>	nmrlearner	Journal club	0	03-09-2012 09:16 AM
Not-NMR: interesting comments about article "Fix the PhD" in Nature See the article here Comments: B. B. Goel: Xianfa Xie:	markber	General	1	04-22-2011 08:26 PM
[Question from NMRWiki Q&A forum] Where can I find current shim values in Bruker Paravision? Where can I find current shim values in Bruker Paravision? Hello, I am a novie to the field. I am trying to record the change in settings post shimming using Bruker ParaVision. I only have access tot he Bruker format files (acqp, reco, 2dseq etc.). I was wondering where in these files can I find the shim values (Z2, XZ, YZ etc.) Thanks.	nmrlearner	News from other NMR forums	0	01-05-2011 11:03 AM
[Question from NMRWiki Q&A forum] Where can I find shim current values in Bruker Where can I find shim current values in Bruker Hello, I am a novie to the field. I am trying to record the change in settings post shimming using Bruker ParaVision. I only have access tot he Bruker format files (acqp, reco, 2dseq etc.). I was wondering where in these files can I find the shim values (Z2, XZ, YZ etc.) Thanks.	nmrlearner	News from other NMR forums	0	01-04-2011 11:03 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off