Stan NMR blog Electron MR in Poland: a free collection of papers

		BioNMR > NMR community > News from NMR blogs
[Stan NMR blog] Electron MR in Poland: a free collection of papers

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

12-09-2010, 10:44 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,779

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Electron MR in Poland: a free collection of papers

Electron MR in Poland: a free collection of papers

An open-access set of 50+ EPR papers published in 'Current Topics in Biophysics'

Source: Stan blog library

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Effect of Freezing Conditions on Distances and Their Distributions Derived from Double Electron Electron Resonance (DEER): A Study of Doubly-Spin-Labeled T4 Lysozyme Effect of Freezing Conditions on Distances and Their Distributions Derived from Double Electron Electron Resonance (DEER): A Study of Doubly-Spin-Labeled T4 Lysozyme Publication year: 2012 Source: Journal of Magnetic Resonance, Available online 24 January 2012</br> Elka R.Georgieva, Aritro S.Roy, Vladimir M.Grigoryants, Petr P.Borbat, Keith A.*Earle, ...</br> Pulsed dipolar ESR spectroscopy, DEER and DQC, require frozen samples. An important issue in the biological application of this technique is how the freezing rate and concentration of cryoprotectant could possibly affect the...	nmrlearner	Journal club	0	01-25-2012 08:56 AM
Please apply for RapiData 2012, a course on Data Collection and Stru Please apply for RapiData 2012, a course on Data Collection and Stru We are offering RapiData 2012, the fourteenth offering of our popular course: Rapid Data Collection and Structure Solving at the NSLS: A Practical Course in More...	nmrlearner	Conferences	0	12-10-2011 02:38 AM
Addendum to the paper “Dead-time free measurement of dipole–dipole interactions between electron spins” by M. Pannier, S. Veit, A. Godt, G. Jeschke, and H.W. Spiess [J. Magn. Reson. 142 (2000) 331–340] Addendum to the paper “Dead-time free measurement of dipole–dipole interactions between electron spins” by M. Pannier, S. Veit, A. Godt, G. Jeschke, and H.W. Spiess Publication year: 2011 Source: Journal of Magnetic Resonance, In Press, Corrected Proof, Available online 3 September 2011</br> Hans Wolfgang, Spiess</br> The development of four-pulse DEER as described, which has been published in the Journal of Magnetic Resonance more than 10 years ago. The corresponding paper is an example where a slight advance, such as adding a refocusing pulse, which in retrospect looks so simple,...	nmrlearner	Journal club	0	09-03-2011 07:32 PM
[NMR paper] Gated electron transfers and electron pathways in azurin: a NMR dynamic study at mult Gated electron transfers and electron pathways in azurin: a NMR dynamic study at multiple fields and temperatures. Related Articles Gated electron transfers and electron pathways in azurin: a NMR dynamic study at multiple fields and temperatures. J Mol Biol. 2004 Oct 1;342(5):1599-611 Authors: Zhuravleva AV, Korzhnev DM, Kupce E, Arseniev AS, Billeter M, Orekhov VY Dynamic properties of electron transfer pathways in a small blue copper cupredoxin are explored using an extensive 15N NMR relaxation study of reduced Pseudomonas aeruginosa azurin...	nmrlearner	Journal club	0	11-24-2010 10:01 PM
[NMR900 blog] Two NMR papers in PNAS Two NMR papers in PNAS P.A. Chong, H. Lin, J.L. Wrana, and J.D. Forman-Kay, "Coupling of tandem Smad ubiquitination regulatory factor (Smurf) WW domains modulates target specificity," Proc. Natl. Acad. Sci. USA 107 (2010) 18404-18409. http://dx.doi.org/10.1073/pnas.1003023107 H. Ghasriani, T. Ducat, C.T. Hart, F. Hafizi, N. Chang, A. Al-Baldawi, S.H. Ayed, P. Lundström, J.A.R. Dillon, and N.K. Goto, "Appropriation of the MinD protein-interaction motif by the dimeric interface of the bacterial cell division regulator MinE," Proc. Natl. Acad. Sci. USA 107 (2010) 18416-18421....	nmrlearner	News from NMR blogs	0	10-27-2010 08:58 PM
[NMR900 blog] NMR papers in Nature NMR papers in Nature M.J. Plevin, D.L. Bryce, and J. Boisbouvier, "Direct Detection of CH/pi Interactions in Proteins," Nature Chemistry (2010) in press. http://dx.doi.org/10.1038/nchem.650 J. Chan, A.R. Lewis, M. Gilbert, M.-F. Karwaski, A.J. Bennet, "A direct NMR method for the measurement of competitive kinetic isotope effects," Nature Chemical Biology (2010) online. http://dx.doi.org/10.1038/nchembio.352 T.D. Ladd, F. Jelezko, R. Laflamme, Y. Nakamura, C. Monroe and J.L. O’Brien, "Quantum computers," Nature 464 (2010) 45-53. (Review)...	nmrlearner	News from NMR blogs	0	08-22-2010 02:30 AM
[NMR900 blog] NMR papers in Nature NMR papers in Nature M.J. Plevin, D.L. Bryce, and J. Boisbouvier, "Direct Detection of CH/pi Interactions in Proteins," Nature Chemistry (2010) in press. http://dx.doi.org/10.1038/nchem.650 J. Chan, A.R. Lewis, M. Gilbert, M.-F. Karwaski, A.J. Bennet, "A direct NMR method for the measurement of competitive kinetic isotope effects," Nature Chemical Biology (2010) online. http://dx.doi.org/10.1038/nchembio.352 T.D. Ladd, F. Jelezko, R. Laflamme, Y. Nakamura, C. Monroe and J.L. O’Brien, "Quantum computers," Nature 464 (2010) 45-53. (Review)...	nmrlearner	News from NMR blogs	0	08-22-2010 02:18 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off