Spin-spin coupling constants can have values greater than or less than zero. The absolute sign of the coupling constants cannot be discerned from the simple examination of a 1H NMR spectrum. The E.COSY1 (Exclusive COrrelation SpectroscopY) technique is one method which can be used to determine the relative signs of coupling constants. E.COSY is a phase sensitive COSY variant which produces off-diagonal signals showing only the active coupling (i.e. the coupling directly responsible for the cross-peak) as 2x2 antiphase square tetrads displaced in both the F2 and F1 domains by an amount equal to the passive coupling constants (i.e. the couplings not directly responsible for the cross peak). The slope of a line drawn through the cross-peaks is used to determine the relative signs of the passive coupling constants. The sign of the slope depends on whether the signs of the passive couplings are the same or whether they differ. The figure below shows the gradient E.COSY spectrum2 (using the Bruker pulse program,"ecosygpph" ) for the ABX three-spin system in phenylalanine.The cross-peaks highlighted in yellow in the top panel of the figure are expanded in the bottom panel. Black contours are positive and red contours are negative. The panel on the bottom left shows the cross-peaks for AX and BX. In the case of the AX cross-peak, the line drawn through the cross peak has a positive slope indicating that the passive couplings JAB and JBX are of opposite sign. The line drawn through the BX cross peak also has a positive slope indicating that the passive couplings JAB and JAX are of opposite sign. From this we can deduce that JAX and JBX are of the same sign. The panel on the bottom right shows the cross-peak for AB. In this case, the line drawn through the cross peak has a negative slope confirming that the passive couplings JAX and JBX are of the same sign. In conclusion, the geminal and vicinal coupling constants are of opposite sign.
1. C. Griesinger, O.W. Sorensen & R.R. Ernst, J. Magn. Reson.75, ; 474 - 492 (1987).
2. The ecosygpph pulse program produces spectra similar to those described in reference 1 as "complimentary" E.COSY spectra. The slope of the lines through the cross peaks in "complementary" E.COSY spectra are of opposite sign to those obtained from the E.COSY spectra described in reference 1.
Conformational dependence of 13C shielding and coupling constants for methionine
Abstract Methionine residues fulfill a broad range of roles in protein function related to conformational plasticity, ligand binding, and sensing/mediating the effects of oxidative stress. A high degree of internal mobility, intrinsic detection sensitivity of the methyl group, and low copy number have made methionine labeling a popular approach for NMR investigation of selectively labeled protein macromolecules. However, selective labeling approaches are subject to more limited information content. In order to optimize the information available from such studies, we have performed DFT...
nmrlearner
Journal club
0
08-25-2010 03:51 PM
[NMR paper] The impact of direct refinement against three-bond HN-C alpha H coupling constants on
The impact of direct refinement against three-bond HN-C alpha H coupling constants on protein structure determination by NMR.
Related Articles The impact of direct refinement against three-bond HN-C alpha H coupling constants on protein structure determination by NMR.
J Magn Reson B. 1994 May;104(1):99-103
Authors: Garrett DS, Kuszewski J, Hancock TJ, Lodi PJ, Vuister GW, Gronenborn AM, Clore GM
nmrlearner
Journal club
0
08-22-2010 03:33 AM
[NMR paper] The impact of direct refinement against three-bond HN-C alpha H coupling constants on
The impact of direct refinement against three-bond HN-C alpha H coupling constants on protein structure determination by NMR.
Related Articles The impact of direct refinement against three-bond HN-C alpha H coupling constants on protein structure determination by NMR.
J Magn Reson B. 1994 May;104(1):99-103
Authors: Garrett DS, Kuszewski J, Hancock TJ, Lodi PJ, Vuister GW, Gronenborn AM, Clore GM