Bruker Biospin has recently released a new version of its Dynamics Center software in two parts for fitting relaxation and diffusion NMR parameters. General Dynamics Center is intended for analysing T1, T2, T1rho, DOSY, REDOR, and CP buildup experiments, while Protein Dynamics Center can be used to fit heteronuclear NOE, T1, T2, T1rho, exchange, and NOE/T1/T2 data.
The program is very straightforward to use for 2D and 3D datasets, with automated peak picking, selection of the fitting function (although it is possible to fit data to any function desired), and generation of a report as an Excel-readable or text file. DOSY data can even be fit using an inverse Laplace transform.
The program currently exists in Linux and Windows formats. General Dynamics Center is free and only requires an existing TopSpin processing license, either full or a three-year student license, while Protein Dynamics Center requires a separate license. A Macintosh version is under development, as is the implementation of new methods.
To download the program and tutorials, go to http://www.bruker-biospin.com log in (anyone can create an account), and from there, click on Service & Support / NMR / Software Downloads / Dynamics Center.
For more information about the program, contact Martine Monette (martine.monette "at" bruker.ca) or Robin Stein (robin.stein "at" bruker.ca), and for more information about the Protein Dynamics Center license, contact Joseph Weiss (joseph.weiss "at" bruker.ca), or request a three-month demo license from any of us.
[Question from NMRWiki Q&A forum] PC rebooted suddenly and Topspin got problem. Has this happened to you?
PC rebooted suddenly and Topspin got problem. Has this happened to you?
Hello all,I was measuring on a Topspin 300MHz and multizg was running (T1ir and cpmg). I unplugged my usb flash memory from the pc and it rebooted!!! After that, in Topspin no run was possible. With a zg command, it was showing "starting RCU and TCU" and not proceeding anymore. I tried restarting the pc several times. But no success.What do you think? The multizg that was running at the beginning was supposed to take around 9 hours. Is that possible that the machine still has this command and is not accepting any other...
nmrlearner
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03-14-2012 04:00 AM
[Question from NMRWiki Q&A forum] halt command in topspin 3
halt command in topspin 3
Hello all nmr wikier last week we have upgraded software topspin2.1 to topspin3 on bruker av400 machine.when we use halt command within multizg the next experiment didn't run while spooler is on I mean the current experiment halted with fid save but did didn't run next experiments in the quee and finshes with multizg finish while on periviously version it run automatically the next experiment in the quee on halting.Does any body knows where is the problem.(spooler is on enable in setres)
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nmrlearner
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12-02-2011 01:51 AM
[KPWU blog] Bruker?s Topspin running on Mac
Bruker?s Topspin running on Mac
Balance the report as I just made a post for Agilent’s VnmrJ. I found from a web blog article that introduces the news–Bruker’s Topspin 3.1 for Mac. Bruker’s*brief introduction of Topspin for Mac machine includes features: Mac OS X platform for TopSpin processing Inspire a new generation of NMR users, experts and students alike Entirely http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=584&subd=kpwu&ref=&feed=1
Go to KPWU blog to read complete post.
nmrlearner
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10-19-2011 09:38 PM
[Question from NMRWiki Q&A forum] modulo or integer division in topspin
modulo or integer division in topspin
Hi!
is there a possibility to perform an integer division or a modulo calculation in topspin 2.1?
Thank you!
nmrlearner
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09-06-2011 08:17 PM
[Question from NMRWiki Q&A forum] Converting from 2 column data to Topspin fid
Converting from 2 column data to Topspin fid
I am new to Topspin and would like to know if a 2 column dataset (containing time versus intensity) can be converted into an fid file that then can be processed using Topspin commands such as efp. Any guidance in this would be very welcome.
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nmrlearner
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06-27-2011 04:30 AM
[Question from NMRWiki Q&A forum] processing varian data in topspin?
processing varian data in topspin?
Hi
I have recently moved to a lab which has a varian magnet, in the past I have only used brukers. The people here use NMRpipe for processing which I am not a fan of. Is there a simple way to process Varian data in topspin? I know this is relatively simple for 1D but I am told it cant be done easily for 2D or 3D data? is this the case?
Any answer would be appreciated
nmrlearner
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12-28-2010 05:27 AM
[Question from NMRWiki Q&A forum] what is different between nmrpipe and topspin softwares
what is different between nmrpipe and topspin softwares
hi, i am new user to nmrpipe i want to know how this nmrpipe differs with topspin 2.1 software because when i use same phase values in two softwares ,i observed two different spectra.1.can i use abs2,abs1 commands(for watersuppression in topspin) in nmrpipe also ?2.After determining noise level from nmrpipe what value we have to use in first and factors.3.how to fit nmrpipe full spectra to squre layout like topspin does.4.cant we phase spectra in test.ft2 after getting two dimensional spectrum.
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nmrlearner
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11-01-2010 11:04 AM
[Question from NMRWiki Q&A forum] How to reference indirect dimensions in Topspin?
How to reference indirect dimensions in Topspin?
Hello, When I process 3d data on topspin with the ft3d command, I get the three-dimensional spectra, but the chemical shifts of the the indirect third dimension are not right (even though the sr parameter is correct) We do 3d ncc experiments on proteins (solid-state NMR). Anyone does 3d data processing on tospin and it actually works?
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Dynamics Center for TopSpin
Linear Mode
