This article presents a comprehensive description of the spin dynamics underlying the main DNP mechanisms leading to nuclear signal enhancements in glassy amorphous solids containing free radicals. The emphasis of the article to derive quantum mechanically based formalisms that enable us to analyze experimental DNP data. After a short review of the history of DNP, rate equations of the eigenstate populations of static coupled electron–nuclear spin systems are introduced, based on their spin-Hamiltonians and including spin-lattice and cross-relaxation mechanisms. They are used to simulate the dynamics of small spin systems under microwave (MW) irradiation and the basic Solid Effect (SE), Cross Effect (CE), and Overhauser DNP (O-DNP) enhancement mechanisms are presented. These calculations are then extended to systems containing up to 10 spins and are used to calculate EPR, ELDOR, and DNP spectra. Plots showing the population of the eigenstates vs energy are used to demonstrate the conditions for the thermal mixing mechanism and the corresponding EPR and ELDOR spectra are discussed. Following these calculations, the electron spectral diffusion (eSD) and the indirect Cross Effect (iCE) numerical models are introduced and used to analyze EPR and DNP spectra of real samples. In the last section, the basic theory of magic angle spinning (MAS) DNP on small spin systems is summarized and the influence of the rotor events on the quasiperiodic steady-state DNP enhancements discussed. The origins of depolarization effects occurring when no MW is applied are described. Finally, the nuclear spin diffusion process inside the diffusion barrier is studied using multielectron and multinuclear calculations.
Understanding 'disease mechanisms' of ALS - Science Daily
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Understanding 'disease mechanisms' of ALS
Science Daily
Ubiquitin and UBQLN2 are part of what of Castaneda calls a "quality-control mechanism," which maintains proteins at their proper levels during the lifespan of a cell. (Unlike other cells, which live several days or weeks, neurons typically last an ...
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03-10-2018 01:53 AM
Biomolecular MRI Reporters: evolution of new mechanisms
Biomolecular MRI Reporters: evolution of new mechanisms
Publication date: Available online 3 June 2017
Source:Progress in Nuclear Magnetic Resonance Spectroscopy</br>
Author(s): Arnab Mukherjee, Hunter C. Davis, Pradeep Ramesh, George J. Lu, Mikhail G. Shapiro</br>
Magnetic resonance imaging (MRI) is a powerful technique for observing the function of specific cells and molecules inside living organisms. However, compared to optical microscopy, in which fluorescent protein reporters are available to visualize hundreds of cellular functions ranging from...
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06-05-2017 03:02 AM
[NMR paper] Mechanisms of amyloid formation revealed by solution NMR.
Mechanisms of amyloid formation revealed by solution NMR.
Related Articles Mechanisms of amyloid formation revealed by solution NMR.
Prog Nucl Magn Reson Spectrosc. 2015 Aug;88-89:86-104
Authors: Karamanos TK, Kalverda AP, Thompson GS, Radford SE
Abstract
Amyloid fibrils are proteinaceous elongated aggregates involved in more than fifty human diseases. Recent advances in electron microscopy and solid state NMR have allowed the characterization of fibril structures to different extents of refinement. However, structural details...
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08-19-2015 03:24 PM
Mechanisms of amyloid formation revealed by solution NMR
Mechanisms of amyloid formation revealed by solution NMR
Publication date: Available online 26 May 2015
Source:Progress in Nuclear Magnetic Resonance Spectroscopy</br>
Author(s): Theodoros K. Karamanos , Arnout P. Kalverda , Gary S. Thompson , Sheena E. Radford</br>
Amyloid fibrils are proteinaceous elongated aggregates involved in more than fifty human diseases. Recent advances in electron microscopy and solid state NMR have allowed the characterization of fibril structures to different extents of refinement. However, structural details about the mechanism of...
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05-28-2015 12:56 AM
The C solid DNP mechanisms with perchlorotriphenylmethyl radicals - the role of Cl
From The DNP-NMR Blog:
The C solid DNP mechanisms with perchlorotriphenylmethyl radicals - the role of Cl
Vigier, F.M., et al., The C solid DNP mechanisms with perchlorotriphenylmethyl radicals - the role of Cl. Phys Chem Chem Phys, 2014.
http://www.ncbi.nlm.nih.gov/pubmed/25096750
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08-16-2014 03:59 AM
On Mechanisms of Dynamic Nuclear Polarization in Solids
From The DNP-NMR Blog:
On Mechanisms of Dynamic Nuclear Polarization in Solids
Thurber, K.R. and R. Tycko, On Mechanisms of Dynamic Nuclear Polarization in Solids. Israel Journal of Chemistry, 2013: p. n/a-n/a.
http://dx.doi.org/10.1002/ijch.201300116
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02-25-2014 12:44 AM
[NMR paper] Asymmetric doublets in MAS NMR: coherent and incoherent mechanisms.
Asymmetric doublets in MAS NMR: coherent and incoherent mechanisms.
Related Articles Asymmetric doublets in MAS NMR: coherent and incoherent mechanisms.
Magn Reson Chem. 2007 Dec;45 Suppl 1:S161-73
Authors: Skrynnikov NR
Abstract
It has been long noted that J-resolved doublets observed in solid-state MAS experiments are asymmetric. The asymmetry has been attributed to a coherent interference effect involving dipolar and CSA interactions. Recently, Bernd Reif and co-workers suggested that under fast MAS conditions the coherent portion...
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04-03-2013 08:22 PM
NMR reveals novel mechanisms of protein activity regulation.
NMR reveals novel mechanisms of protein activity regulation.
NMR reveals novel mechanisms of protein activity regulation.
Protein Sci. 2011 Mar 14;
Authors: Kalodimos CG
NMR spectroscopy is one of the most powerful tools for the characterization of biomolecular systems. A unique aspect of NMR is its capacity to provide an integrated insight into both the structure and intrinsic dynamics of biomolecules. In addition, NMR can provide site-resolved information about the conformation entropy of binding, as well as about energetically excited...