BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 04-27-2013, 01:19 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,777
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Design of a quadrature surface coil for hyperpolarized 13C MRS cardiac metabolism studies in pigs

From The DNP-NMR Blog:

Design of a quadrature surface coil for hyperpolarized 13C MRS cardiac metabolism studies in pigs

Due to ENC I'm a bit behind catching up with the literature ... This article below was just published in Concepts in Magnetic Resonance and shows the diverse applications of DNP.






Giovannetti, G., et al., Design of a quadrature surface coil for hyperpolarized 13C MRS cardiac metabolism studies in pigs. Concepts in Magnetic Resonance Part B: Magnetic Resonance Engineering, 2013. 43(2): p. 69-77.


http://dx.doi.org/10.1002/cmr.b.21235


This work describes the design of a quadrature surface coil constituted by a circular loop and a butterfly coil, employed in transmit/receive (TX/RX) mode for hyperpolarized 13C studies of pig heart with a clinical 3T scanner. The coil characterization is performed by developing an SNR model for coil performance evaluation in terms of coil resistance, sample-induced resistance and magnetic field pattern. Experimental SNR-vs.-depth profiles, extracted from the [1–13C]acetate phantom chemical shift image (CSI), showed good agreement with the theoretical SNR-vs.-depth profiles. Moreover, the performance of the quadrature coil was compared with the single TX/RX circular and TX/RX butterfly coil, in order to verify the advantage of the proposed configuration over the single coils throughout the volume of interest for cardiac imaging in pig. Finally, the quadrature surface coil was tested by acquiring metabolic maps with hyperpolarized [1–13C]pyruvate injected i.v. in a pig.






Go to The DNP-NMR Blog for more info.
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] Effects of Phe-to-Trp mutation and fluorotryptophan incorporation on the solution structure of cardiac troponin C, and analysis of its suitability as a potential probe for in situ NMR studies.
Effects of Phe-to-Trp mutation and fluorotryptophan incorporation on the solution structure of cardiac troponin C, and analysis of its suitability as a potential probe for in situ NMR studies. Related Articles Effects of Phe-to-Trp mutation and fluorotryptophan incorporation on the solution structure of cardiac troponin C, and analysis of its suitability as a potential probe for in situ NMR studies. Protein Sci. 2005 Sep;14(9):2447-60 Authors: Wang X, Mercier P, Letourneau PJ, Sykes BD 19F NMR spectroscopy is potentially a powerful tool for...
nmrlearner Journal club 0 12-01-2010 06:56 PM
[NMR paper] NMR studies of protein surface accessibility.
NMR studies of protein surface accessibility. Related Articles NMR studies of protein surface accessibility. J Biol Chem. 2001 Nov 9;276(45):42455-61 Authors: Niccolai N, Ciutti A, Spiga O, Scarselli M, Bernini A, Bracci L, Di Maro D, Dalvit C, Molinari H, Esposito G, Temussi PA Characterization of protein surface accessibility represents a new frontier of structural biology. A surface accessibility investigation for two structurally well-defined proteins, tendamistat and bovine pancreatic trypsin inhibitor, is performed here by a combined...
nmrlearner Journal club 0 11-19-2010 08:44 PM
[NMR paper] Cardiac troponin I induced conformational changes in cardiac troponin C as monitored
Cardiac troponin I induced conformational changes in cardiac troponin C as monitored by NMR using site-directed spin and isotope labeling. Related Articles Cardiac troponin I induced conformational changes in cardiac troponin C as monitored by NMR using site-directed spin and isotope labeling. Biochemistry. 1995 Oct 17;34(41):13343-52 Authors: Kleerekoper Q, Howarth JW, Guo X, Solaro RJ, Rosevear PR Conformational changes in both free cardiac troponin C (cTnC) and in complex with a recombinant troponin I protein were observed by means of a...
nmrlearner Journal club 0 08-22-2010 03:50 AM
[NMR paper] In vivo 13C and 15N NMR studies of methylamine metabolism in Pseudomonas species MA.
In vivo 13C and 15N NMR studies of methylamine metabolism in Pseudomonas species MA. Related Articles In vivo 13C and 15N NMR studies of methylamine metabolism in Pseudomonas species MA. J Biol Chem. 1991 Jun 25;266(18):11705-13 Authors: Jones JG, Bellion E Pseudomonas species MA was grown with methylamine as a sole source of carbon and nitrogen enabling the total flow of carbon and nitrogen into this organism to be simultaneously monitored in vivo using 13C and 15N NMR. Methylamine was rapidly and extensively incorporated into the methyl...
nmrlearner Journal club 0 08-21-2010 11:16 PM
[NMR paper] 31P and 1H NMR studies of ethanolamine-linked phosphoglycerides metabolism in human T
31P and 1H NMR studies of ethanolamine-linked phosphoglycerides metabolism in human T lymphocytes. Related Articles 31P and 1H NMR studies of ethanolamine-linked phosphoglycerides metabolism in human T lymphocytes. Cell Mol Biol. 1991;37(7):705-11 Authors: Ricciolini R, Miccheli A, Peluso G, Delfini M, Conti F Aqueous and organic extracts of peripheral human T lymphocytes and of T lymphoblastoid cell lines have been examinated by 31P and 1H NMR spectroscopy in order to study the metabolism of ethanolamine (Etn) linked phosphoglycerides. The...
nmrlearner Journal club 0 08-21-2010 11:16 PM
[NMR paper] Comparative NMR studies on cardiac troponin C and a mutant incapable of binding calci
Comparative NMR studies on cardiac troponin C and a mutant incapable of binding calcium at site II. Related Articles Comparative NMR studies on cardiac troponin C and a mutant incapable of binding calcium at site II. Biochemistry. 1991 Oct 22;30(42):10236-45 Authors: Brito RM, Putkey JA, Strynadka NC, James MN, Rosevear PR One- and two-dimensional NMR techniques were used to study both the influence of mutations on the structure of recombinant normal cardiac troponin C (cTnC3) and the conformational changes induced by Ca2+ binding to site II,...
nmrlearner Journal club 0 08-21-2010 11:12 PM
[NMR paper] Comparative NMR studies on cardiac troponin C and a mutant incapable of binding calci
Comparative NMR studies on cardiac troponin C and a mutant incapable of binding calcium at site II. Related Articles Comparative NMR studies on cardiac troponin C and a mutant incapable of binding calcium at site II. Biochemistry. 1991 Oct 22;30(42):10236-45 Authors: Brito RM, Putkey JA, Strynadka NC, James MN, Rosevear PR One- and two-dimensional NMR techniques were used to study both the influence of mutations on the structure of recombinant normal cardiac troponin C (cTnC3) and the conformational changes induced by Ca2+ binding to site II,...
nmrlearner Journal club 0 08-21-2010 11:12 PM
[NMR paper] 31P NMR studies of phosphate metabolism in the ovulatory process induced by gonadotro
31P NMR studies of phosphate metabolism in the ovulatory process induced by gonadotropins in perfused rabbit ovary. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_120x27.gif Related Articles 31P NMR studies of phosphate metabolism in the ovulatory process induced by gonadotropins in perfused rabbit ovary. NMR Biomed. 1999 Jun;12(4):249-55 Authors: Tanaka K, Mizukami A, Kojima N, Ishikawa M The concentrations of phosphate metabolites were measured in perfused...
nmrlearner Journal club 0 08-21-2010 04:03 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:20 AM.


Map