NMR Geek blog Biomolecular NMR Lectures by Prof. Prestegard

		BioNMR > NMR community > News from NMR blogs
[NMR Geek blog] Biomolecular NMR Lectures by Prof. Prestegard

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rating:

Display Modes

04-19-2014, 06:35 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Biomolecular NMR Lectures by Prof. Prestegard

Biomolecular NMR Lectures by Prof. Prestegard

Awesome set of lectures on Biomolecular NMR course (along with video of the lectures) is available at this link.

Full story can be found on the NMR geek blog

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Prof. Konstantin Pervushin's NMR group Prof. Konstantin Pervushin affiliation: Structural Biology Biozentrum, University of Basel Basel / Switzerland http://www.biozentrum.unibas.ch/associated_group/pervushin/images/konstantinB.jpg A copy of Porf. Pervushin's research interests from the group website:	markber	NMR research groups	0	11-14-2010 06:26 AM
[BMNRC community] Software & Scripts and pulse sequences at Prof. YANG Daiwen? Lab Software & Scripts and pulse sequences at Prof. YANG Daiwen? Lab http://yangdw.science.nus.edu.sg/ Go to BMNRC community to find more info about this topic.	nmrlearner	News from other NMR forums	0	08-26-2010 06:37 AM
Dartmouth University NMR lectures The following Dartmouth University NMR lectures can be downloaded from their website: Introduction to Protein Structure and NMR JIGSAW and NMR Computational Protein Design Residual Dipolar Couplings (RDCs) in NMR Structural Biology Nuclear Vector Replacement for Automated NMR Resonance Assignments and 3D Structure Homology Detection Protein Flexibility (1): FIRST and NMA Basics Protein Flexibility (2): Loop Closure and Inverse Kinematics Protein Flexibility (3): ROCK and FRODA	Rex	Educational web pages	0	09-04-2008 02:19 PM
Prof. Richard Neutze's NMR lectures Some NMR lectures by Prof. Richard Neutze (Göteborg Centre for Structural Biology, Sweden): 1. Protein NMR - introduction and concepts 2. Protein NMR - experimental techniques 3. Sequence-specific resonance assignment 4. NMR structure determination 5. Protein dynamics by NMR 6. Projection spectroscopy - reducing the dimensionality of multi-nuclei experiments	linawaed	Educational web pages	0	09-02-2008 07:57 PM
Prof. Walter Chazin's classnotes on biomolecular NMR Here are some NMR classnotes by Prof. Walter Chazin (Vanderbilt University Center for Structural Biology): Introduction to Structural Biology Biomolecular Nuclear Magnetic Resonance Spectroscopy How NMR is Used for the Study of Biomacromolecules More of his classnotes can be found on the Vanderbilt website: http://structbio.vanderbilt.edu/chazin/classnotes/	linawaed	Educational web pages	0	09-02-2008 07:22 PM
Duke University's NMR lectures The Duke University website contains lectures covering a wide range of NMR topics - it would make a great starting point for any newcomers to NMR. Lecture 1 - Introduction to Protein Structure and NMR Lecture 2 - Protein and NMR Structural Biology I Lecture 3 - Protein and NMR Structural Biology II Lecture 4 - Solution Structures of Native and Denatured Proteins Using RDCs Lecture 6 - JIGSAW and NMR Lecture 7 - Computational Protein Design Lecture 8 - Nonribosomal Code & Protein Design Lecture 10 - RDCs in NMR Structural Biology	timbo	Educational web pages	0	08-29-2008 12:09 PM
NMR guides from Prof. Stone lab The following NMR guides are available from Prof. Stone websiteProtein dynamicsDynamics Guide: from relaxation to dynamics parameters Protein structure calculation Structure Calculation Guide using XPLOR Hardware Spectrometer Hardware : Descriptions, diagrams, and recommended configurations Tuning the Probe Software	nmrlearner	Educational web pages	0	05-07-2005 10:01 AM
3 NMR research positions in Prof. Stark's lab Information about the following three NMR positions was found on the website of Prof. Ruth E. Stark TWO RESEARCH STAFF POSITIONS Postdoctoral positions are available IMMEDIATELY to develop and apply NMR methods for the study of biomolecules and their complexes: (1) molecular structure of soluble protein complexes involved in fatty acid transport and metabolism; (2) molecular structure and biosynthesis of insoluble biopolymers involved in stress response of plant tissues and melanization of fungal cell walls, respectively. These positions require a Ph.D. in chemistry or...	nmrlearner	Job marketplace	0	03-24-2005 07:08 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off