Basics of EPR for NMR spectroscopists

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Basics of EPR for NMR spectroscopists

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NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

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10-19-2020, 05:07 PM

nmrlearner

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Basics of EPR for NMR spectroscopists

From The DNP-NMR Blog:

Basics of EPR for NMR spectroscopists

Dear NMR Enthusiast,

The 16th Global NMR Educational Tutorial will be given by Nino Wili, PhD student in Prof. Gunnar Jeschke's lab at ETH Zurich, Switzerland, on the topic:

"Basics of EPR for NMR spectroscopists”.

Abstract:
In this tutorial lecture, I will describe similarities and differences between NMR and EPR. Continuous-wave EPR will be introduced, as well as basic pulse sequences for hyperfine spectroscopy (ESEEM, ENDOR, ELDOR-detected NMR) and pulsed dipolar spectroscopy (DEER, RIDME, DQC). I will assume previous knowledge about the Bloch equations, the spin Hamiltonian description, product operator formalism, and anisotropic interactions. Examples will focus on molecular systems in chemistry and biology.

Speaker's biography:
2016: MSc, ETH Zurich (Prof. Matthias Ernst)
2017-present: PhD, ETH Zurich (Prof. Gunnar Jeschke)

Webinar details:
Time: Tuesday, October 13, 2020, 08:00 AM California or 11:00 am Boston or 5:00 PM Paris or 8:30 PM Delhi

Join Meeting: https://ucsb.zoom.us/j/92480496788
Meeting ID: 924 8049 6788

Best regards,
Global NMR Discussion Meetings
YouTube Channel: https://www.youtube.com/c/GlobalNMRD...eetings/videos

[Organizers:
Adrian Draney (Guido Pintacuda Lab, CRMN lyon)
Amrit Venkatesh (Aaron Rossini Lab, Iowa State Uni)
Asif Equbal (Songi Han Lab, UCSB)
Blake Wilson (Robert Tycko Lab, NIH)
Michael Hope (Lyndon Emsley Lab, EPFL)
PinelopiMoutzouri (Lyndon Emsley Lab, EPFL) ]
====================================
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Go to The DNP-NMR Blog for more info.

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