BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 03-07-2020, 06:20 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,732
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default 1H T1? Edited 13C CPMAS Spectra - Pharmaceutical Analysis

1H T1? Edited 13C CPMAS Spectra - Pharmaceutical Analysis

Active pharmaceutical ingredients (API's) are often mixed with other compounds (excipients) used to dilute, stabilize, sweeten, color, flavour, bind, coat (etc...) the medication. Often the API is a crystalline compound while the excipients are noncrystalline or amorphous. When analyzing pharmaceutical pills by solid-state 13C CPMAS NMR, one often wants to observe the active crystalline API and not the amorphous non-active excipients. This can sometimes be accomplished by collecting spectra with differing recycle delays, as the excipients often have shorter 1H T1 relaxation times than the crystalline API. An example of this is given here. Crystalline API compounds often have much longer 1H T1?'s than the amorphous excipient compounds. One can modify the simple CPMAS pulse sequence to discriminate against the excipients with short 1H T1?'s by introducing an additional 1H spin locking pulse before the cross polarization during which the transverse 1H magnetization of the excpient decays to zero while that of the API decays to a much smaller extent. After the 1H spin locking pulse, cross polarization is applied, transferring polarization from the remaining API 1H magnetization to the API 13C. This modification to the CPMAS experiment is shown in the figure below.
The figure below illustrates this technique applied to generic acetylsalicylic acid (ASA) tablets.
The spectrum in the bottom panel is a 13C CPMAS spectrum of a crushed generic ASA tablet with a 60 second recycle time and a 2 msec contact time. One can see the nine 13C resonances of the ASA plus the broad excipient signals between 50 ppm and 110 ppm (highlighted in yellow). The spectrum in the middle panel was acquired under identical conditions with an additional 10 watt, 12 msec 1H spin locking pulse applied prior to cross polarization. Clearly, the broader signals of the excipients (with short 1H T1?) are suppressed leaving only the resonances of the ASA. The top panel is a weighted difference of the two spectra showing only the signals of the excipients. Although a pharmaceutical example is used here, the technique is applicable generally to any mixture of solids with different 1H T1?'s.


Source: University of Ottawa NMR Facility Blog
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Quality assessment of biologics: higher order structure analysis using NMR - European Pharmaceutical Review
Quality assessment of biologics: higher order structure analysis using NMR European Pharmaceutical ReviewThe webinar will describe how 2D NMR can offer protein biochemists unprecedented analytical precision. By assigning just one spectrum, users can obtain a ... Quality assessment of biologics: higher order structure analysis using NMR - European Pharmaceutical Review More...
nmrlearner Online News 0 01-07-2019 05:49 AM
[U. of Ottawa NMR Facility Blog] Glycine as a 13C CPMAS Setup Sample
Glycine as a 13C CPMAS Setup Sample Glycine is an excellent setup compound for 13C CPMAS NMR measurements. Its utility in this regard has been described in detail.1,2 It can easily be observed in one scan and has reasonably short 1H T1's, allowing it to be used for 1H 90° pulse calibration and to setup the Hartmann Hahn matching condition. The width of the methylene carbon signal can be conveniently used to evaluate the proton decoupling efficiency. The width and shape of the carbonyl signal are very sensitive to the angle at which the sample is spun and can be used to set the magic...
nmrlearner News from NMR blogs 0 06-21-2018 10:11 PM
[NMR paper] Entire-Dataset Analysis of NMR Fast-Exchange Titration Spectra: A Mg(2+) Titration Analysis for HIV-1 Ribonuclease H Domain.
Entire-Dataset Analysis of NMR Fast-Exchange Titration Spectra: A Mg(2+) Titration Analysis for HIV-1 Ribonuclease H Domain. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-pubmed-acspubs.jpg Related Articles Entire-Dataset Analysis of NMR Fast-Exchange Titration Spectra: A Mg(2+) Titration Analysis for HIV-1 Ribonuclease H Domain. J Phys Chem B. 2016 Dec 15;120(49):12420-12431 Authors: Karki I, Christen MT, Spiriti J, Slack RL, Oda M, Kanaori K, Zuckerman DM, Ishima R Abstract This...
nmrlearner Journal club 0 12-17-2016 07:18 AM
[U. of Ottawa NMR Facility Blog] Mixture Resolution in 13C CPMAS NMR
Mixture Resolution in 13C CPMAS NMR The recycle delay necessary to get the highest signal-to-noise ratio in a multi-scan 13C CPMAS NMR spectrum depends on the relaxation properties of the protons in the sample. The protons in pure solid samples normally belong to a single homogeneous dipolar coupled network. As a result, all of the protons in the coupled network have a common T1 relaxation time. One would expect the same behavior for a mixture of compounds only if the components were mixed at the molecular level. If the compounds are not mixed at the molecular level, the sample...
nmrlearner News from NMR blogs 0 03-27-2015 07:43 AM
Cross-polarisation edited ENDOR
From The DNP-NMR Blog: Cross-polarisation edited ENDOR Rizzato, R., et al., Cross-polarisation edited ENDOR. Mol. Phys., 2013: p. 1-15. http://dx.doi.org/10.1080/00268976.2013.816795
nmrlearner News from NMR blogs 0 09-14-2013 01:46 AM
[Question from NMRWiki Q&A forum] 2D NOESY filtered/edited experiments
2D NOESY filtered/edited experiments what are the name for 2D NOESY filtered/edited experiments like F1fF2f, F1fF2e, F2f, F1eF2e in Bruker 700MHz ?.Here is the link of that paper which has above experimentshttp://www.ncbi.nlm.nih.gov/pubmed/14739639 Check if somebody has answered this question on NMRWiki QA forum
nmrlearner News from other NMR forums 0 10-15-2012 10:49 PM
Affymetrix launches NG Class detergents for better protein analysis - Pharmaceutical Business Review
<img alt="" height="1" width="1" /> Affymetrix launches NG Class detergents for better protein analysis Pharmaceutical Business Review Affymetrix chief commercial officer Andy Last said the new NG Class Detergents give biologists enhanced tools to solve the structure of membrane proteins using advanced techniques, such as nuclear magnetic resonance and X-ray diffraction. ... and more &raquo; Affymetrix launches NG Class detergents for better protein analysis - Pharmaceutical Business Review More...
nmrlearner Online News 0 02-15-2011 09:29 PM
[Nature network NMR forum] Multivariate analysis of NMR spectra (0 replies)
Multivariate analysis of NMR spectra (0 replies) Hi, I am currently debating the benefit of different multivariate analysis methods for analysing NMR spectra and wondered if anyone had any ideas? I have implemented principal components analysis (PCA) and canonical variates analysis (CVA). I am now looking into partial least squares discriminate analysis (PLS-DA). My data contains a continuum of disease scores which I have categorised as Low Moderate and High. I would like to create a prediction model of disease state. The CVA analysis is supervised, so takes these...
nmrlearner News from other NMR forums 0 08-21-2010 03:29 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:11 AM.


Map