The image above can be drew followed by steps in*my earlier post, which shows single color of the nucleotide rings and bonds. I saw a discussion list at PyMol forum today that an user requested a way to display different colors of the nucleotide rings. Below is the example image I tested (using PDB: 2WCC). [...]
Anyone interested in consulting/contracting for a Nucleic Acid/Oligonucleotide NMR project in the Boston Area?
Anyone interested in consulting/contracting for a Nucleic Acid/Oligonucleotide NMR project in the Boston Area?
Instrument is a Varian and it would be a long term consultancy/contract. Possibility for direct Hire.
Please direct resumes to Eric{at}onescience.com. http://www.linkedin.com/in/biotechnologyrecruiting
Thanks for any referrals!!!
nmrlearner
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01-21-2012 06:26 PM
[NMR images] Nucleic acid and protein NMR
http://images.betterworldbooks.com/047/NMR-of-Proteins-and-Nucleic-Acids-9780471828938.jpg
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11/11/2011 8:27:59 AM GMT
Nucleic acid and protein NMR
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nmrlearner
NMR pictures
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11-12-2011 01:40 AM
Specific Labeling of ThreonineMethyl Groups for NMR Studies of Protein–Nucleic Acid Complexes
Specific Labeling of ThreonineMethyl Groups for NMR Studies of Protein–Nucleic Acid Complexes
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/bi201496d/aop/images/medium/bi-2011-01496d_0001.gif
Biochemistry
DOI: 10.1021/bi201496d
http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA
http://feeds.feedburner.com/~r/acs/bichaw/~4/atmM9dIKVj8
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nmrlearner
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11-04-2011 03:17 AM
Solution NMR structure of VF0530 from Vibrio fischeri reveals a nucleic acid-binding function.
Solution NMR structure of VF0530 from Vibrio fischeri reveals a nucleic acid-binding function.
Solution NMR structure of VF0530 from Vibrio fischeri reveals a nucleic acid-binding function.
Proteins. 2011 Oct;79(10):2988-91
Authors: Aramini JM, Rossi P, Fischer M, Xiao R, Acton TB, Montelione GT
Abstract
Protein domain family PF09905 (DUF2132) is a family of small domains of unknown function that are conserved in a wide range of bacteria. Here we describe the solution NMR structure of the 80-residue VF0530 protein from Vibrio fischeri,...
nmrlearner
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09-10-2011 06:51 PM
The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries
The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries
Abstract Several pilot experiments have indicated that improvements in older NMR structures can be expected by applying modern software and new protocols (Nabuurs et al. in Proteins 55:483â??186, 2004; Nederveen et al. in Proteins 59:662â??672, 2005; Saccenti and Rosato in J Biomol NMR 40:251â??261, 2008). A recent large scale X-ray study also has shown that modern software can significantly improve the quality of X-ray structures that were deposited more than a few years ago (Joosten et al. in J. Appl...
nmrlearner
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01-09-2011 12:46 PM
[NMR paper] NMR studies of protein-nucleic acid interactions.
NMR studies of protein-nucleic acid interactions.
Related Articles NMR studies of protein-nucleic acid interactions.
Methods Mol Biol. 2004;278:289-312
Authors: Varani G, Chen Y, Leeper TC
Protein-DNA and protein-RNA complexes play key functional roles in every living organism. Therefore, the elucidation of their structure and dynamics is an important goal of structural and molecular biology. Nuclear magnetic resonance (NMR) studies of protein and nucleic acid complexes have common features with studies of protein-protein complexes: the...
nmrlearner
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11-24-2010 09:25 PM
[NMR paper] NMR - this other method for protein and nucleic acid structure determination.
NMR - this other method for protein and nucleic acid structure determination.
Related Articles NMR - this other method for protein and nucleic acid structure determination.
Acta Crystallogr D Biol Crystallogr. 1995 May 1;51(Pt 3):249-70
Authors: Wüthrich K
For a quarter of a century X-ray diffraction in single crystals was unique in its ability to solve three-dimensional structures of proteins and nucleic acids at atomic resolution. The situation changed in 1984 with the completion of a protein structure determination by nuclear magnetic...
nmrlearner
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08-22-2010 03:41 AM
[NMR paper] NMR studies of protein-nucleic acid complexes: structures, solvation, dynamics and co
NMR studies of protein-nucleic acid complexes: structures, solvation, dynamics and coupled protein folding.
Related Articles NMR studies of protein-nucleic acid complexes: structures, solvation, dynamics and coupled protein folding.
Q Rev Biophys. 1999 Feb;32(1):57-98
Authors: Härd T