PhD in computational spin dynamics at the Universities of Oxford and Oldenburg
We are seeking a graduate student with experience of, or an interest in, computational NMR or EPR who might be nervous of committing to a PhD in Brexit Britain but who would still welcome a strong connection to a leading UK university.
Based in the Department of Physics at the University of Oldenburg, Germany, the student will be supervised by Peter Hore (Department of Chemistry, University of Oxford). The position is funded by the DFG (https://www.sfb1372.de/) as part of Sonderforschungsbereich 1372: Magnetoreception and navigation in vertebrates: from biophysics to brain and behaviour. Further details can be found at: https://www.sfb1372.de/sig01-2.
[NMR paper] Applications of NMR and computational methodologies to study protein dynamics.
Applications of NMR and computational methodologies to study protein dynamics.
Related Articles Applications of NMR and computational methodologies to study protein dynamics.
Arch Biochem Biophys. 2017 May 05;:
Authors: Narayanan C, Bafna K, Roux LD, Agarwal PK, Doucet N
Abstract
Overwhelming evidence now illustrates the defining role of atomic-scale protein flexibility in biological events such as allostery, cell signaling, and enzyme catalysis. Over the years, spin relaxation nuclear magnetic resonance (NMR) has provided...
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05-10-2017 09:55 PM
Applications of NMR and computational methodologies to study protein dynamics
Applications of NMR and computational methodologies to study protein dynamics
Publication date: Available online 5 May 2017
Source:Archives of Biochemistry and Biophysics</br>
Author(s): Chitra Narayanan, Khushboo Bafna, Louise D. Roux, Pratul K. Agarwal, Nicolas Doucet</br>
Overwhelming evidence now illustrates the defining role of atomic-scale protein flexibility in biological events such as allostery, cell signaling, and enzyme catalysis. Over the years, spin relaxation nuclear magnetic resonance (NMR) has provided significant insights on the structural...
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0
05-07-2017 04:20 PM
Protein dynamics from X-ray and NMR [Biophysics and Computational Biology]
Protein dynamics from X-ray and NMR
Fenwick, R. B., van den Bedem, H., Fraser, J. S., Wright, P. E....
Date: 2014-01-28
Detailed descriptions of atomic coordinates and motions are required for an understanding of protein dynamics and their relation to molecular recognition, catalytic function, and allostery. Historically, NMR relaxation measurements have played a dominant role in the determination of the amplitudes and timescales (picosecond–nanosecond) of bond vector fluctuations, whereas high-resolution X-ray... Read More
PNAS:
Number: 4
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01-29-2014 12:50 AM
Computational approaches to the interpretation of NMR data for studying protein dynamics
Computational approaches to the interpretation of NMR data for studying protein dynamics
2 March 2012
Publication year: 2012
Source:Chemical Physics, Volume 396</br>
</br>
Experimental studies of protein structure and dynamics with NMR provide the classical example of the power of theoretical approaches for the interpretation of experimental results. In this paper we review recent developments in experimental techniques extending the applicability of NMR to the study of protein structure and motion, and advances in the theoretical description.
Graphical abstract
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02-03-2013 10:13 AM
Computational Study andMolecular Orbital Analysisof NMR Shielding, Spin–Spin Coupling, and Electric Field Gradientsof Azido Platinum Complexes
Computational Study andMolecular Orbital Analysisof NMR Shielding, Spin–Spin Coupling, and Electric Field Gradientsof Azido Platinum Complexes
Kiplangat Sutter and Jochen Autschbach
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja3040762/aop/images/medium/ja-2012-040762_0008.gif
Journal of the American Chemical Society
DOI: 10.1021/ja3040762
http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA
http://feeds.feedburner.com/~r/acs/jacsat/~4/XTeiJ4ddvO4
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08-04-2012 05:22 AM
Cu-SOD structure and dynamics by solid-state NMR [Biophysics and Computational Biology]
Cu-SOD structure and dynamics by solid-state NMR
Knight, M. J., Pell, A. J., Bertini, I., Felli, I. C., Gonnelli, L., Pierattelli, R., Herrmann, T., Emsley, L., Pintacuda, G....
Date: 2012-07-10
We introduce a new approach to improve structural and dynamical determination of large metalloproteins using solid-state nuclear magnetic resonance (NMR) with 1H detection under ultrafast magic angle spinning (MAS). The approach is based on the rapid and sensitive acquisition of an extensive set of 15N and 13C nuclear relaxation rates. The system on which we demonstrate these methods is the...
Spin Choreography vs Spin Dynamics
http://www.bionmr.com/uploads/Freeman.jpg
Has anybody read Spin Choreography: Basic Steps in High Resolution NMR by Ray Freemanhttp://www.assoc-amazon.com/e/ir?t=bionmr-20&l=ur2&o=1? Is it better, worse or just different than Spin Dynamics by Malcom Levitthttp://www.assoc-amazon.com/e/ir?t=bionmr-20&l=ur2&o=1?