BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 04-27-2018, 10:26 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,777
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Variance of Commercial Powdered Milks Analyzed by 1H-NMR and Impact on Detection of Adulterants.

Variance of Commercial Powdered Milks Analyzed by 1H-NMR and Impact on Detection of Adulterants.

Related Articles Variance of Commercial Powdered Milks Analyzed by 1H-NMR and Impact on Detection of Adulterants.

J Agric Food Chem. 2018 Apr 26;:

Authors: Harnly JM, Bergana MM, Adams KM, Moore JC, Xie Z

Abstract
1H-NMR spectra for 66 commercial powdered milk samples were analyzed by PCA, SIMCA, and pooled, crossed ANOVA. It was found that the sample type (skim milk powder or non-fat dry milk), the supplier, the production site, the processing temperature (high, medium, or low temperature), and the day of analysis provided statistically significant sources of variation. Interestingly, inexact alignment (deviations of ±0.002 ppm) of the spectral reference peak was a significant source of variation and fine alignment was necessary before the variation arising from the other experimental factors could be accurately evaluated. Using non-targeted analysis, the lowest detectable adulteration for dicyandiamide, melamine, and sucrose was 0.05%, maltodextrin and urea was 0.5%, ammonium sulfate and whey was 5%, and soy protein isolate was undetectable using methods described herein. The measurement of variance and detection of adulteration were relatively unaffected by the resolution. Similar results were obtained with un-binned data (0.0003 ppm resolution) and binning of 333 data points (0.1 ppm resolution).


PMID: 29697263 [PubMed - as supplied by publisher]



More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Characterization of the Functional Variance in MbtH-likeProtein Interactions with a Nonribosomal Peptide Synthetase
Characterization of the Functional Variance in MbtH-likeProtein Interactions with a Nonribosomal Peptide Synthetase http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00517/20170920/images/medium/bi-2017-00517a_0009.gif Biochemistry DOI: 10.1021/acs.biochem.7b00517 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/xqmqyv9xwnM More...
nmrlearner Journal club 0 09-21-2017 02:38 AM
Detecting and accounting for multiple sources of positional variance in peak list registration analysis and spin system grouping
Detecting and accounting for multiple sources of positional variance in peak list registration analysis and spin system grouping Abstract Peak lists derived from nuclear magnetic resonance (NMR) spectra are commonly used as input data for a variety of computer assisted and automated analyses. These include automated protein resonance assignment and protein structure calculation software tools. Prior to these analyses, peak lists must be aligned to each other and sets of related peaks must be grouped based on common chemical shift dimensions. Even when...
nmrlearner Journal club 0 08-17-2017 12:56 AM
[NMR paper] Interactions between a Heparin Trisaccharide Library and FGF-1 Analyzed by NMR Methods.
Interactions between a Heparin Trisaccharide Library and FGF-1 Analyzed by NMR Methods. Related Articles Interactions between a Heparin Trisaccharide Library and FGF-1 Analyzed by NMR Methods. Int J Mol Sci. 2017 Jun 17;18(6): Authors: García-Jiménez MJ, Gil-Caballero S, Canales Á, Jiménez-Barbero J, de Paz JL, Nieto PM Abstract FGF-1 is a potent mitogen that, by interacting simultaneously with Heparan Sulfate Glycosaminoglycan HSGAG and the extracellular domains of its membrane receptor (FGFR), generates an intracellular signal...
nmrlearner Journal club 0 06-22-2017 07:44 AM
[NMR paper] Diazole-based powdered cocrystal featuring a helical hydrogen-bonded network: Structure determination from PXRD, solid-state NMR and computer modeling.
Diazole-based powdered cocrystal featuring a helical hydrogen-bonded network: Structure determination from PXRD, solid-state NMR and computer modeling. Related Articles Diazole-based powdered cocrystal featuring a helical hydrogen-bonded network: Structure determination from PXRD, solid-state NMR and computer modeling. Solid State Nucl Magn Reson. 2014 Dec 30; Authors: Sardo M, Santos SM, Babaryk AA, López C, Alkorta I, Elguero J, Claramunt RM, Mafra L Abstract We present the structure of a new equimolar 1:1 cocrystal formed by...
nmrlearner Journal club 0 01-22-2015 01:20 PM
[Stan NMR blog] Commercial fMRI lie detection service
Commercial fMRI lie detection service 'No Lie MRI' - the very first commercial venture offering fMRI lie detection services Source: Stan blog library
nmrlearner News from NMR blogs 0 01-12-2011 01:32 AM
[NMR paper] Acid-induced denaturation of Escherichia coli ribonuclease HI analyzed by CD and NMR
Acid-induced denaturation of Escherichia coli ribonuclease HI analyzed by CD and NMR spectroscopies. Related Articles Acid-induced denaturation of Escherichia coli ribonuclease HI analyzed by CD and NMR spectroscopies. Biopolymers. 2003 Jun;69(2):176-88 Authors: Yamasaki K, Yamasaki T, Kanaya S, Oobatake M Acid-induced denaturation of the ribonuclease HI protein from Escherichia coli was analyzed by CD and NMR spectroscopies. The CD measurement revealed that the acid denaturation at 10 degrees C proceeds from the native state (N-state) to a...
nmrlearner Journal club 0 11-24-2010 09:01 PM
[Stan NMR blog] Commercial fMRI lie detection service
Commercial fMRI lie detection service 'No Lie MRI' - the very first commercial venture offering fMRI lie detection services Source: Stan blog library
nmrlearner News from NMR blogs 0 08-27-2010 06:16 PM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 12:59 AM.


Map