Abstract Poly- and oligo-saccharides are commonly employed as antigens in many vaccines. These antigens contain phosphoester structural elements that are crucial to the antigenicity, and hence the effectiveness of the vaccine. Nuclear Magnetic Resonance (NMR) is a powerful tool for the site-specific identification of phosphoesters in saccharides. We describe here two advances in the characterization of phosphoesters in saccharides: (1) the use of 1Hâ??31P GHMBC to determine the site-specific identity of phosphoester moieties in heterogeneous mixtures and (2) the use of Unsymmetrical/Generalized Indirect Covariance (U/GIC) to calculate a carbon-phosphorus 2D spectrum. The sensitivity of the 1Hâ??31P GHMBC is far greater than the â??standardâ?? 1Hâ??31P GHSQC and allows long-range 3â??5JHP couplings to be readily detected. This is the first example to be reported of using U/GIC to calculate a carbon-phosphorus spectrum. The U/GIC processing affords, in many cases, a fivefold to tenfold or greater increase in signal-to-noise ratios in the calculated spectrum. When coupled with the high sensitivity of 1Hâ??31P HMBC, U/GIC processing allows the complete and unambiguous assignments of phosphoester moieties present in heterogeneous samples at levels of ~5% (or less) of the total sample, expanding the breadth of samples that NMR can be used to analyze. This new analytical technique is generally applicable to any NMR-observable phosphoester.
Content Type Journal Article
Category Article
Pages 1-11
DOI 10.1007/s10858-011-9563-8
Authors
Edward R. Zartler, Vaccine Analytical Development, Merck Research Labs, Merck & Co., West Point, PA 19486, USA
Gary E. Martin, Structure Elucidation Group, Merck Research Labs, Merck & Co., Summit, NJ 07901, USA
Ultrafast quantitative 2D NMR: an efficient tool for the measurement of specific isotopic enrichments in complex biological mixtures.
Ultrafast quantitative 2D NMR: an efficient tool for the measurement of specific isotopic enrichments in complex biological mixtures.
Ultrafast quantitative 2D NMR: an efficient tool for the measurement of specific isotopic enrichments in complex biological mixtures.
Anal Chem. 2011 Apr 15;83(8):3112-9
Authors: Giraudeau P, Massou S, Robin Y, Cahoreau E, Portais JC, Akoka S
Two-dimensional nuclear magnetic resonance (2D NMR) is a promising tool for studying metabolic fluxes by measuring (13)C-enrichments in complex mixtures of (13)C-labeled...
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Analysis of complex mixtures using high-resolution nuclear magnetic resonance spectroscopy and chemometrics
Analysis of complex mixtures using high-resolution nuclear magnetic resonance spectroscopy and chemometrics
Publication year: 2011
Source: Progress in Nuclear Magnetic Resonance Spectroscopy, In Press, Accepted Manuscript, Available online 12 May 2011</br>
James S., McKenzie , James A., Donarski , Julie C., Wilson , Adrian J., Charlton</br>
*Highlights:*? Analysis of complex mixtures using NMR spectroscopy. ? Use of chemometrics for interpretation of spectra. ? Review of sample handling approaches. ? Discussion of spectral processing methods. ? Discussion of supervised and...
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Mapping allostery through the covariance analysis of NMR chemical shifts.
Mapping allostery through the covariance analysis of NMR chemical shifts.
Mapping allostery through the covariance analysis of NMR chemical shifts.
Proc Natl Acad Sci U S A. 2011 Mar 28;
Authors: Selvaratnam R, Chowdhury S, Vanschouwen B, Melacini G
Allostery is a fundamental mechanism of regulation in biology. The residues at the end points of long-range allosteric perturbations are commonly identified by the comparative analyses of structures and dynamics in apo and effector-bound states. However, the networks of interactions mediating the...
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[NMR paper] NMR spectroscopic filtration of polypeptides and proteins in complex mixtures.
NMR spectroscopic filtration of polypeptides and proteins in complex mixtures.
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J Biomol NMR. 2004 Aug;29(4):505-16
Authors: Rajagopalan S, Chow C, Raghunathan V, Fry CG, Cavagnero S
Due to the inherent complexity of the natural biological environment, most studies on polypeptides, proteins and nucleic acids have so far been performed in vitro, away from physiologically relevant conditions. Nuclear magnetic resonance is an ideal technique to extend...
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11-24-2010 10:01 PM
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Phosphate ions in bone: identification of a calcium-organic phosphate complex by 31P solid-state NMR spectroscopy at early stages of mineralization.
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Previous 31P cross-polarization and differential cross-polarization magic angle spinning (CP/MAS and DCP/MAS) solid-state NMR...
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An NMR spectroscopic identity test for the control of the capsular polysaccharide from Haemophilus influenzae type b.
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Authors: Lemercinier X, Jones C
We describe the use of Nuclear Magnetic Resonance (NMR) spectroscopy to control the identity of purified bulk capsular polysaccharide from Haemophilus influenzae type b (Hib), and derivatised forms, used in the production of Hib...
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[NMR paper] Assessment of cholesteryl ester transfer protein function in lipoprotein mixtures by
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NMR Biomed. 1997 Oct;10(7):303-8
Authors: Korhonen A, Ala-Korpela M, Liinamaa MJ, Jokisaari J, Kesäniemi YA, Savolainen MJ
Studies of cholesteryl ester transfer protein (CETP)...
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08-22-2010 05:08 PM
NMR of an ester
NMR of an ester
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NMR of an ester
The H NMR of a molecule with diastereotopic protons is explained.
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