Related ArticlesStructural analysis of peptide fragment 71-93 of transthyretin by NMR spectroscopy and electron microscopy: insight into amyloid fibril formation.
Biochemistry. 1994 Jan 11;33(1):33-41
Authors: Jarvis JA, Munro SL, Craik DJ
A peptide corresponding to the amino acid region 71-93 of the plasma protein transthyretin (TTR) has been synthesized to investigate its role in the native folding of the molecule and the possible relationship between mutations in this region and amyloid formation of TTR. In the native structure this fragment includes a beta-strand followed by a short helix and turns back on itself to form part of an antiparallel beta-sheet. Electron microscopy has shown that the peptide is not intrinsically amyloidogenic. NMR spectroscopy has been used to investigate the conformational dependency of the peptide on the solution conditions. Minor populations of peptide showing partial turns were apparent in deuterated dimethyl sulfoxide (DMSO-d6). Some indication of nascent helix between residues 5 and 12 was observed in water, and upon the addition of 20% trifluoroethanol (TFE) the span of helix was confirmed. The intrinsic tendency to form a helical structure between residues 5 and 12 in solution suggests that the helical region, also present in the native crystallographically determined TTR structure at corresponding residues 75-82, is an important folding initiation site. In contrast, the beta-sheet motif observed in the native structure was not detected in solution. It is proposed that mutations in TTR occurring in the helical region result in subtle changes in the TTR structure leading to amyloid fibril formation.
Expression and purification of (15)N- and (13)C-isotope labeled 40-residue human Alzheimer's ?-amyloid peptide for NMR-based structural analysis.
Expression and purification of (15)N- and (13)C-isotope labeled 40-residue human Alzheimer's ?-amyloid peptide for NMR-based structural analysis.
Expression and purification of (15)N- and (13)C-isotope labeled 40-residue human Alzheimer's ?-amyloid peptide for NMR-based structural analysis.
Protein Expr Purif. 2011 May 27;
Authors: Long F, Cho W, Ishii Y
Amyloid fibrils of Alzheimer's ?-amyloid peptide (A?) are a primary component of amyloid plaques, a hallmark of Alzheimer's disease (AD). Enormous attention has been given to the structural...
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06-07-2011 11:05 AM
[NMR paper] NMR structural analysis of a peptide mimic of the bridging sheet of HIV-1 gp120 in methanol and water.
NMR structural analysis of a peptide mimic of the bridging sheet of HIV-1 gp120 in methanol and water.
Related Articles NMR structural analysis of a peptide mimic of the bridging sheet of HIV-1 gp120 in methanol and water.
Biochem J. 2005 Sep 1;390(Pt 2):573-81
Authors: Chakraborty K, Shivakumar P, Raghothama S, Varadarajan R
gp120 is a subunit of the Env (viral envelope protein) of HIV-1. The protein consists of inner and outer domains linked by a bridging sheet. Several gp120 residues that bind the neutralizing antibody 17b as well as the...
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12-01-2010 06:56 PM
[NMR paper] Probing solvent accessibility of transthyretin amyloid by solution NMR spectroscopy.
Probing solvent accessibility of transthyretin amyloid by solution NMR spectroscopy.
Related Articles Probing solvent accessibility of transthyretin amyloid by solution NMR spectroscopy.
J Biol Chem. 2004 Feb 13;279(7):5699-707
Authors: Olofsson A, Ippel JH, Wijmenga SS, Lundgren E, Ohman A
The human plasma protein transthyretin (TTR) may form fibrillar protein deposits that are associated with both inherited and idiopathic amyloidosis. The present study utilizes solution nuclear magnetic resonance spectroscopy, in combination with...
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[NMR paper] Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment
Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment of an antibody in solution investigated by heteronuclear three-dimensional NMR spectroscopy.
Related Articles Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment of an antibody in solution investigated by heteronuclear three-dimensional NMR spectroscopy.
Biochemistry. 1994 Mar 22;33(11):3296-303
Authors: Freund C, Ross A, Plückthun A, Holak TA
Fv fragments, heterodimers of the variable light (VL) and variable heavy chain...
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08-22-2010 03:33 AM
[NMR paper] Structural analysis of peptide fragment 71-93 of transthyretin by NMR spectroscopy an
Structural analysis of peptide fragment 71-93 of transthyretin by NMR spectroscopy and electron microscopy: insight into amyloid fibril formation.
Related Articles Structural analysis of peptide fragment 71-93 of transthyretin by NMR spectroscopy and electron microscopy: insight into amyloid fibril formation.
Biochemistry. 1994 Jan 11;33(1):33-41
Authors: Jarvis JA, Munro SL, Craik DJ
A peptide corresponding to the amino acid region 71-93 of the plasma protein transthyretin (TTR) has been synthesized to investigate its role in the native...
nmrlearner
Journal club
0
08-22-2010 03:33 AM
[NMR paper] Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment
Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment of an antibody in solution investigated by heteronuclear three-dimensional NMR spectroscopy.
Related Articles Structural and dynamic properties of the Fv fragment and the single-chain Fv fragment of an antibody in solution investigated by heteronuclear three-dimensional NMR spectroscopy.
Biochemistry. 1994 Mar 22;33(11):3296-303
Authors: Freund C, Ross A, Plückthun A, Holak TA
Fv fragments, heterodimers of the variable light (VL) and variable heavy chain...
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08-22-2010 03:33 AM
[NMR paper] 1H NMR analysis of fibril-forming peptide fragments of transthyretin.
1H NMR analysis of fibril-forming peptide fragments of transthyretin.
Related Articles 1H NMR analysis of fibril-forming peptide fragments of transthyretin.
Int J Pept Protein Res. 1994 Oct;44(4):388-98
Authors: Jarvis JA, Kirkpatrick A, Craik DJ
Peptide fragments of the protein transthyretin, previously shown to form cross beta-sheet amyloid-like fibrils in vitro, were investigated using 1H 1D and 2D NMR techniques. TTR 10-20, TTR 105-115 as well as a substituted analogue, (TTR 105-115Met111) all formed amyloid-like fibrils readily in 20-30%...
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08-22-2010 03:29 AM
[NMR paper] Conformational studies on a peptide fragment representing the RNA-binding N-terminus
Conformational studies on a peptide fragment representing the RNA-binding N-terminus of a viral coat protein using circular dichroism and NMR spectroscopy.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles Conformational studies on a peptide fragment representing the RNA-binding N-terminus of a viral coat protein using circular dichroism and NMR spectroscopy.
Eur J Biochem. 1991 Oct 15;201(2):489-94
Authors: van der Graaf M, Hemminga MA
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