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NMR processing:
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NMR assignment:
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MARS
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PINE
Side-chains:
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ASDP
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Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
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Fragment-based:
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Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
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Torsion angles from chemical shifts:
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Promega- Proline
Secondary structure from chemical shifts:
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d2D
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From structure:
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Proshift
PPM
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From sequence:
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Disordered proteins:
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Format conversion & validation:
CCPN
From NMR-STAR 3.1
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NMR sample preparation:
Protein disorder:
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Protein solubility:
camLILA
ccSOL
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camGroEL
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Old 11-24-2010, 08:58 PM
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Default Solution structure of human Mts1 (S100A4) as determined by NMR spectroscopy.

Solution structure of human Mts1 (S100A4) as determined by NMR spectroscopy.

Related Articles Solution structure of human Mts1 (S100A4) as determined by NMR spectroscopy.

Biochemistry. 2002 Oct 22;41(42):12670-80

Authors: Vallely KM, Rustandi RR, Ellis KC, Varlamova O, Bresnick AR, Weber DJ

Mts1 is a member of the S100 family of Ca2+-binding proteins and is implicated in promoting tumor progression and metastasis. To better understand the structure-function relationships of this protein and to begin characterizing its Ca2+-dependent interaction with protein binding targets, the three-dimensional structure of mts1 was determined in the apo state by NMR spectroscopy. As with other S100 protein family members, mts1 is a symmetric homodimer held together by noncovalent interactions between two helices from each subunit (helices 1, 4, 1', and 4') to form an X-type four-helix bundle. Each subunit of mts1 has two EF-hand Ca2+-binding domains: a pseudo-EF-hand (or S100-hand) and a typical EF-hand that are brought into proximity by a small two-stranded antiparallel beta-sheet. The S100-hand is formed by helices 1 and 2, and is similar in conformation to other members of the S100 family. In the typical EF-hand, the position of helix 3 is similar to that of another member of the S100 protein family, calcyclin (S100A6), and less like that of other S100 family members for which three-dimensional structures are available in the calcium-free state (e.g., S100B and S100A1). The differences in the position of helix 3 in the apo state of these four S100 proteins are likely due to variations in the amino acid sequence in the C-terminus of helix 4 and in loop 2 (the hinge region) and could potentially be used to subclassify the S100 protein family.

PMID: 12379109 [PubMed - indexed for MEDLINE]



Source: PubMed
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