A? is widely recognized as a key molecule in Alzheimer's disease, causing neurotoxicity through A? aggregates such as A? oligomers and fibrils. A?40 and A?42, composed of 40 and 42 residues, respectively, are the major A? species in human brain. A?42 aggregates much faster than A?40 but the mechanism of such difference in aggregation propensity is poorly understood. Using NMR spin relaxation, we have shown that A?40 and A?42 monomers have different dynamics in both backbone and sidechain on the ps-ns time scale. A?42 is more rigid in C-terminus in both backbone and sidechain while A?40 has more rigid methyl groups in the central hydrophobic cluster (CHC: A?17-21). These observations are consistent with differences in the major conformations of A?40 and A?42 monomers derived from replica exchange MD (REMD). To further demonstrate the relevance of dynamics in aggregation mechanism, a perturbation was introduced to A?42 in the form of M35 oxidation. After M35 side chain oxidation to sulfoxide, A?42 experiences A?40-like changes in dynamics. At the same time, M35 oxidation causes dramatic reduction in A?42 aggregation rate. These data have thus established an important role for protein dynamics in the mechanism of A? aggregation.
PMID: 21222639 [PubMed - as supplied by publisher]
Solution NMR structure and dynamics of human apo-S100A1 protein.
Solution NMR structure and dynamics of human apo-S100A1 protein.
Solution NMR structure and dynamics of human apo-S100A1 protein.
J Struct Biol. 2011 Feb 2;
Authors: Nowakowski M, Jaremko L, Jaremko M, Zhukov I, Belczyk A, Bierzy?ski A, Ejchart A
S100A1 belongs to the EF-hand superfamily of calcium binding proteins. It is a representative of the S100 protein family based on amino acid sequence, three-dimensional structure, and biological function as a calcium signal transmitter. It is a homodimer of noncovalently bound subunits. S100A1, like most...
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[NMR paper] Protein dynamics from solution NMR: theory and applications.
Protein dynamics from solution NMR: theory and applications.
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Cell Biochem Biophys. 2003;37(3):187-211
Authors: Kempf JG, Loria JP
Solution nuclear magnetic resonance (NMR) spectroscopy is unique in its ability to elucidate the details of atomic-level structural and dynamical properties of biological macromolecules under native-like conditions. Recent advances in NMR techniques and protein sample preparation now allow comprehensive investigation of protein dynamics...
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11-24-2010 09:01 PM
[NMR paper] NMR spectroscopic studies of the DNA-binding domain of the monomer-binding nuclear or
NMR spectroscopic studies of the DNA-binding domain of the monomer-binding nuclear orphan receptor, human estrogen related receptor-2. The carboxyl-terminal extension to the zinc-finger region is unstructured in the free form of the protein.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--highwire.stanford.edu-icons-externalservices-pubmed-standard-jbc_full_free.gif Related Articles NMR spectroscopic studies of the DNA-binding domain of the monomer-binding nuclear orphan receptor, human estrogen related receptor-2. The carboxyl-terminal extension to the zinc-finger region...
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08-22-2010 05:08 PM
[NMR paper] Solution secondary structure of calcium-saturated troponin C monomer determined by mu
Solution secondary structure of calcium-saturated troponin C monomer determined by multidimensional heteronuclear NMR spectroscopy.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles Solution secondary structure of calcium-saturated troponin C monomer determined by multidimensional heteronuclear NMR spectroscopy.
Protein Sci. 1995...
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[NMR paper] Solution structure and dynamics of ras p21.GDP determined by heteronuclear three- and
Solution structure and dynamics of ras p21.GDP determined by heteronuclear three- and four-dimensional NMR spectroscopy.
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Biochemistry. 1994 Mar 29;33(12):3515-31
Authors: Kraulis PJ, Domaille PJ, Campbell-Burk SL, Van Aken T, Laue ED
A high-resolution solution structure of the GDP form of a truncated version of the ras p21 protein (residues 1-166) has been determined using NMR spectroscopy. Ras p21 is the...
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08-22-2010 03:33 AM
[NMR paper] Solution structure and dynamics of ras p21.GDP determined by heteronuclear three- and
Solution structure and dynamics of ras p21.GDP determined by heteronuclear three- and four-dimensional NMR spectroscopy.
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Biochemistry. 1994 Mar 29;33(12):3515-31
Authors: Kraulis PJ, Domaille PJ, Campbell-Burk SL, Van Aken T, Laue ED
A high-resolution solution structure of the GDP form of a truncated version of the ras p21 protein (residues 1-166) has been determined using NMR spectroscopy. Ras p21 is the...
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[NMR paper] Heteronuclear 2D NMR studies of an engineered insulin monomer: assignment and charact
Heteronuclear 2D NMR studies of an engineered insulin monomer: assignment and characterization of the receptor-binding surface by selective 2H and 13C labeling with application to protein design.
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Biochemistry. 1991 Jul 30;30(30):7373-89
Authors: Weiss MA, Hua QX, Lynch CS, Frank BH, Shoelson SE
Insulin provides an important model for...
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[NMR paper] Heteronuclear 2D NMR studies of an engineered insulin monomer: assignment and charact
Heteronuclear 2D NMR studies of an engineered insulin monomer: assignment and characterization of the receptor-binding surface by selective 2H and 13C labeling with application to protein design.
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Biochemistry. 1991 Jul 30;30(30):7373-89
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