Related ArticlesScreening mixtures for biological activity by NMR.
Eur J Biochem. 1997 Jun 15;246(3):705-9
Authors: Meyer B, Weimar T, Peters T
Development of the new drugs often involves the screening of compound libraries for biological activity. Currently, the biologically active component can only be identified if either a pure compound is being tested or if the components of a mixture are spatially separated, for example, on beads. Here, we present an NMR technique based on the transferred nuclear Overhauser effect (transfer NOE) that allows identification and structural characterization of biologically active molecules from a mixture. As an example we demonstrate that from mixtures of oligosaccharides only alpha-L-Fuc-(1-->6)-beta-D-GlcNAc-OMe binds to Aleuria aurantia agglutinin. The sign of transferred NOEs is opposite to NOEs of small molecules that do not bind to the protein and, thus, an unequivocal identification of molecules with binding activity is possible. Normally, the selection of bound ligands is further facilitated in that the absolute intensity of transfer NOEs is much greater than that of NOEs of non-binding molecules. In addition, transfer NOEs provide information on the three-dimensional structure of the ligands in the bound state. Therefore, measuring transfer NOEs of mixtures of small molecules in the presence of large molecules, like proteins, should significantly enhance the options for screening mixtures of compounds for biological activity.
Ultrafast quantitative 2D NMR: an efficient tool for the measurement of specific isotopic enrichments in complex biological mixtures.
Ultrafast quantitative 2D NMR: an efficient tool for the measurement of specific isotopic enrichments in complex biological mixtures.
Ultrafast quantitative 2D NMR: an efficient tool for the measurement of specific isotopic enrichments in complex biological mixtures.
Anal Chem. 2011 Apr 15;83(8):3112-9
Authors: Giraudeau P, Massou S, Robin Y, Cahoreau E, Portais JC, Akoka S
Two-dimensional nuclear magnetic resonance (2D NMR) is a promising tool for studying metabolic fluxes by measuring (13)C-enrichments in complex mixtures of (13)C-labeled...
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[NMR paper] Novel surfactant mixtures for NMR spectroscopy of encapsulated proteins dissolved in low-viscosity fluids.
Novel surfactant mixtures for NMR spectroscopy of encapsulated proteins dissolved in low-viscosity fluids.
Related Articles Novel surfactant mixtures for NMR spectroscopy of encapsulated proteins dissolved in low-viscosity fluids.
Protein Sci. 2005 Nov;14(11):2919-21
Authors: Peterson RW, Pometun MS, Shi Z, Wand AJ
NMR spectroscopy of encapsulated proteins dissolved in low-viscosity fluids is emerging as a tool for biophysical studies of proteins in atomic detail in a variety of otherwise inaccessible contexts. The central element of the...
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[NMR paper] Probing molecular interfaces using 2D magic-angle-spinning NMR on protein mixtures wi
Probing molecular interfaces using 2D magic-angle-spinning NMR on protein mixtures with different uniform labeling.
Related Articles Probing molecular interfaces using 2D magic-angle-spinning NMR on protein mixtures with different uniform labeling.
J Am Chem Soc. 2004 Nov 17;126(45):14746-51
Authors: Etzkorn M, Böckmann A, Lange A, Baldus M
A general NMR strategy to directly study molecular interfaces under magic angle spinning is introduced. The approach is based on the spectroscopic analysis of uniformly, but heterogeneously, labeled...
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[NMR paper] NMR spectroscopic filtration of polypeptides and proteins in complex mixtures.
NMR spectroscopic filtration of polypeptides and proteins in complex mixtures.
Related Articles NMR spectroscopic filtration of polypeptides and proteins in complex mixtures.
J Biomol NMR. 2004 Aug;29(4):505-16
Authors: Rajagopalan S, Chow C, Raghunathan V, Fry CG, Cavagnero S
Due to the inherent complexity of the natural biological environment, most studies on polypeptides, proteins and nucleic acids have so far been performed in vitro, away from physiologically relevant conditions. Nuclear magnetic resonance is an ideal technique to extend...
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11-24-2010 10:01 PM
Simultaneous de Novo Identification of Molecules in Chemical Mixtures by Doubly Indir
Simultaneous de Novo Identification of Molecules in Chemical Mixtures by Doubly Indirect Covariance NMR Spectroscopy
Fengli Zhang, Lei Bruschweiler-Li and Rafael Bru?schweiler
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja106781r/aop/images/medium/ja-2010-06781r_0004.gif
Journal of the American Chemical Society
DOI: 10.1021/ja106781r
http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA
http://feeds.feedburner.com/~r/acs/jacsat/~4/q3oWBh6znmg
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[NMR paper] Assessment of cholesteryl ester transfer protein function in lipoprotein mixtures by
Assessment of cholesteryl ester transfer protein function in lipoprotein mixtures by 1H NMR spectroscopy.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_120x27.gif Related Articles Assessment of cholesteryl ester transfer protein function in lipoprotein mixtures by 1H NMR spectroscopy.
NMR Biomed. 1997 Oct;10(7):303-8
Authors: Korhonen A, Ala-Korpela M, Liinamaa MJ, Jokisaari J, Kesäniemi YA, Savolainen MJ
Studies of cholesteryl ester transfer protein (CETP)...
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08-22-2010 05:08 PM
[NMR paper] Screening mixtures for biological activity by NMR.
Screening mixtures for biological activity by NMR.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles Screening mixtures for biological activity by NMR.
Eur J Biochem. 1997 Jun 15;246(3):705-9
Authors: Meyer B, Weimar T, Peters T
Development of the new drugs often involves the screening of compound libraries for biological activity. Currently, the biologically active component can only be identified if either a pure compound is being...
nmrlearner
Journal club
0
08-22-2010 03:03 PM
[NMR paper] Cardiotoxin II segregates phosphatidylglycerol from mixtures with phosphatidylcholine
Cardiotoxin II segregates phosphatidylglycerol from mixtures with phosphatidylcholine: (31)P and (2)H NMR spectroscopic evidence.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-acspubs.jpg Related Articles Cardiotoxin II segregates phosphatidylglycerol from mixtures with phosphatidylcholine: (31)P and (2)H NMR spectroscopic evidence.
Biochemistry. 1996 Mar 19;35(11):3368-78
Authors: Carbone MA, Macdonald PM
The interaction of the cationic protein cardiotoxin II (CTX II) with mixtures of zwitterionic...