Publication date: August 2014 Source:Progress in Nuclear Magnetic Resonance Spectroscopy, Volume 81
Author(s): Ichrak Toumi , Stefano Caldarelli , Bruno Torrésani
Fourier transform is the data processing naturally associated to most NMR experiments. Notable exceptions are Pulse Field Gradient and relaxation analysis, the structure of which is only partially suitable for FT. With the revamp of NMR of complex mixtures, fueled by analytical challenges such as metabolomics, alternative and more apt mathematical methods for data processing have been sought, with the aim of decomposing the NMR signal into simpler bits. Blind source separation is a very broad definition regrouping several classes of mathematical methods for complex signal decomposition that use no hypothesis on the form of the data. Developed outside NMR, these algorithms have been increasingly tested on spectra of mixtures. In this review, we shall provide an historical overview of the application of blind source separation methodologies to NMR, including methods specifically designed for the specificity of this spectroscopy.
Blind Testing of Routine, Fully Automated Determination of Protein Structures from NMR Data
Blind Testing of Routine, Fully Automated Determination of Protein Structures from NMR Data
8 February 2012
Publication year: 2012
Source:Structure, Volume 20, Issue 2</br>
</br>
The protocols currently used for protein structure determination by nuclear magnetic resonance (NMR) depend on the determination of a large number of upper distance limits for proton-proton pairs. Typically, this task is performed manually by an experienced researcher rather than automatically by using a specific computer program. To assess whether it is indeed possible to generate in a fully...
nmrlearner
Journal club
0
02-03-2013 10:13 AM
Suppression of sampling artefacts in high-resolution four-dimensional NMR spectra using Signal Separation Algorithm
Suppression of sampling artefacts in high-resolution four-dimensional NMR spectra using Signal Separation Algorithm
Publication year: 2011
Source: Journal of Magnetic Resonance, Available online 20 October 2011</br>
Jan*Stanek, Rafal*Augustyniak, Wiktor*Ko?mi?ski</br>
The development of non-uniform sampling (NUS) strategies permits to obtain high-dimensional spectra with increased resolution in significantly reduced experimental time. We extended a previously proposed signal separation algorithm (SSA) to process sparse four-dimensional NMR data. It is employed for two experiments...
nmrlearner
Journal club
0
10-22-2011 10:16 AM
[NMR900 blog] Review in Progress in Nuclear Magnetic Resonance Spectroscopy
Review in Progress in Nuclear Magnetic Resonance Spectroscopy
J.L. Kitevski-LeBlanca and R.S. Prosser, "Current Applications of 19F NMR to Studies of Protein Structure and Dynamics," Progress in Nuclear Magnetic Resonance Spectroscopy (2011) accepted. (Invited Review) http://dx.doi.org/10.1016/j.pnmrs.2011.06.003https://blogger.googleusercontent.com/tracker/8663203727601106205-2432588770174344247?l=nmr900.blogspot.com
Read complete story on NMR900 blog
nmrlearner
News from NMR blogs
0
07-14-2011 08:55 PM
[NMR900 blog] Review in Annual Reports on NMR Spectroscopy
Review in Annual Reports on NMR Spectroscopy
William P. Power "High-Resolution Magic Angle Spinning—Enabling Applications of NMR Spectroscopy to Semi-Solid Phases," Annual Reports on NMR Spectroscopy 72 (2011) 111-156.
http://dx.doi.org/10.1016/B978-0-12-385857-3.00003-7 https://blogger.googleusercontent.com/tracker/8663203727601106205-6075888403019790585?l=nmr900.blogspot.com
Read complete story on NMR900 blog
nmrlearner
News from NMR blogs
0
01-22-2011 03:46 AM
A View into the Blind Spot: Solution NMR Provides New Insights into Signal Transduction Across the Lipid Bilayer.
A View into the Blind Spot: Solution NMR Provides New Insights into Signal Transduction Across the Lipid Bilayer.
Related Articles A View into the Blind Spot: Solution NMR Provides New Insights into Signal Transduction Across the Lipid Bilayer.
Structure. 2010 Dec 8;18(12):1559-1569
Authors: Call ME, Chou JJ
One of the most fundamental problems in cell biology concerns how cells communicate with their surroundings through surface receptors. The last few decades have seen major advances in understanding the mechanisms of receptor-ligand...
nmrlearner
Journal club
0
12-08-2010 06:21 PM
[NMR paper] A solid-state NMR study of molecular mobility and phase separation in co-spray-dried
A solid-state NMR study of molecular mobility and phase separation in co-spray-dried protein-sugar particles.
Related Articles A solid-state NMR study of molecular mobility and phase separation in co-spray-dried protein-sugar particles.
Eur J Pharm Sci. 2005 May;25(1):105-12
Authors: Suihko EJ, Forbes RT, Apperley DC
Molecular mobility and physical form of co-spray-dried sugar-lysozyme formulations were evaluated. Co-spray-dried trehalose:lysozyme and sucrose:lysozyme formulations in 1:9, 1:1 and 9:1 ratios (w:w) were stored at 0% RH and 75%...
nmrlearner
Journal club
0
11-25-2010 08:21 PM
Review in Annual Reports on NMR Spectroscopy
Review in Annual Reports on NMR Spectroscopy
John A. Weil, "Magnetic Resonance of Systems with Equivalent Spin-1/2 Nuclides," Annual Reports on NMR Spectroscopy 71 (2010) 1-34. http://dx.doi.org/10.1016/B978-0-08-089054-8.00001-0https://blogger.googleusercontent.com/tracker/8663203727601106205-6127675147312021987?l=nmr900.blogspot.com
Read complete story on NMR900 blog