BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
 
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Old 08-16-2010, 03:50 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,777
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Radial Sampling for Fast NMR: Concepts and Practices over Three Decades

Radial Sampling for Fast NMR: Concepts and Practices over Three Decades


Publication year: 2010
Source: Progress in Nuclear Magnetic Resonance Spectroscopy, In Press, Accepted Manuscript, Available online 30 July 2010

Brian E., Coggins , Ronald A., Venters , Pei, Zhou

*Accordion spectroscopy:*A method whereby one or more mixing times are incremented simultaneously with the chemical shift evolution time of an indirectly observed dimension.*Algebraic reconstruction technique (ART):*An algorithm for reconstruction of a function from its projections, which relies on the fact that the intensity measurements on the projections are integrals of the intensity values in the original function. This allows one to construct a system of linear equations relating the function values to the projection values, which system can be solved iteratively to yield the spectrum.*Aliasing:*A situation wherein artifactural intensity appears in a spectrum due to uncertainty about signal positions, as...


More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Knowledge-based nonuniform sampling in multidimensional NMR
Knowledge-based nonuniform sampling in multidimensional NMR Abstract The full resolution afforded by high-field magnets is rarely realized in the indirect dimensions of multidimensional NMR experiments because of the time cost of uniformly sampling to long evolution times. Emerging methods utilizing nonuniform sampling (NUS) enable high resolution along indirect dimensions by sampling long evolution times without sampling at every multiple of the Nyquist sampling interval. While the earliest NUS approaches matched the decay of sampling density to the decay of the signal envelope, recent...
nmrlearner Journal club 0 06-06-2011 12:53 AM
[NMR tweet] Nuclear Magnetic Resonance: General Concepts and Applications: http://amzn.to/kufAY0
Nuclear Magnetic Resonance: General Concepts and Applications: http://amzn.to/kufAY0 Published by Shanonhein (Shanon Rimando) on 2011-05-21T07:01:22Z Source: Twitter
nmrlearner Twitter NMR 0 05-21-2011 07:13 AM
[NMR tweet] Nuclear Magnetic Resonance: Concepts and Methods: http://amzn.to/fhZCH2
Nuclear Magnetic Resonance: Concepts and Methods: http://amzn.to/fhZCH2 Published by Carmenfq65 (Carmen Ruben) on 2011-05-01T20:41:56Z Source: Twitter
nmrlearner Twitter NMR 0 05-01-2011 08:52 PM
[NMR tweet] Nuclear Magnetic Resonance: Concepts and Methods: http://amzn.to/fhZCH2
Nuclear Magnetic Resonance: Concepts and Methods: http://amzn.to/fhZCH2 Published by Oraus80 (Ora Spraque) on 2011-04-19T22:14:53Z Source: Twitter
nmrlearner Twitter NMR 0 04-19-2011 11:16 PM
[NMR tweet] Nuclear Magnetic Resonance: Concepts and Methods: http://amzn.to/fhZCH2
Nuclear Magnetic Resonance: Concepts and Methods: http://amzn.to/fhZCH2 Published by Davidph91 (David Newmann) on 2011-04-19T17:27:42Z Source: Twitter
nmrlearner Twitter NMR 0 04-19-2011 05:33 PM
The structural and topological analysis of membrane-associated polypeptides by oriented solid-state NMR spectroscopy: Established concepts and novel developments.
The structural and topological analysis of membrane-associated polypeptides by oriented solid-state NMR spectroscopy: Established concepts and novel developments. The structural and topological analysis of membrane-associated polypeptides by oriented solid-state NMR spectroscopy: Established concepts and novel developments. Biophys Chem. 2010 Nov 12; Authors: Bechinger B, Resende JM, Aisenbrey C Solid-state NMR spectroscopy is a powerful technique for the investigation of membrane-associated peptides and proteins as well as their interactions with...
nmrlearner Journal club 0 12-15-2010 12:03 PM
[NMR paper] Fast multidimensional NMR: radial sampling of evolution space.
Fast multidimensional NMR: radial sampling of evolution space. Related Articles Fast multidimensional NMR: radial sampling of evolution space. J Magn Reson. 2005 Apr;173(2):317-21 Authors: Kupce E, Freeman R Multidimensional NMR spectroscopy can be speeded up by limited radial sampling of the time-domain evolution data. The resulting frequency-domain projections are used to reconstruct the full NMR spectrum. New algorithms are proposed to suppress back-projection artifacts while retaining optimum sensitivity. The method is illustrated by...
nmrlearner Journal club 0 11-25-2010 08:21 PM
Random sampling in multidimensional NMR spectroscopy
Random sampling in multidimensional NMR spectroscopy Publication year: 2010 Source: Progress in Nuclear Magnetic Resonance Spectroscopy, In Press, Accepted Manuscript, Available online 3 August 2010</br> Krzysztof, Kazimierczuk , Jan, Stanek , Anna, Zawadzka-Kazimierczuk , Wiktor, Ko?mi?ski</br> More...
nmrlearner Journal club 0 08-16-2010 03:50 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 04:09 PM.


Map