Publisher’s Note

		BioNMR > Educational resources > Journal club
Publisher’s Note

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

07-07-2012, 10:16 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Publisher’s Note

Publisher’s Note

Publication year: 2012
Source:Progress in Nuclear Magnetic Resonance Spectroscopy, Volume 65

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
NMR structure note: the ferrous iron transport protein C (FeoC) from Klebsiella pneumoniae NMR structure note: the ferrous iron transport protein C (FeoC) from Klebsiella pneumoniae NMR structure note: the ferrous iron transport protein C (FeoC) from Klebsiella pneumoniae Content Type Journal Article Category NMR structure note Pages 1-5 DOI 10.1007/s10858-012-9633-6	nmrlearner	Journal club	0	05-17-2012 08:40 AM
NMR structure note: human esophageal cancer-related gene 2 NMR structure note: human esophageal cancer-related gene 2 NMR structure note: human esophageal cancer-related gene 2 Content Type Journal Article Category NMR structure note Pages 1-6 DOI 10.1007/s10858-012-9622-9 Authors	nmrlearner	Journal club	0	04-30-2012 05:23 AM
Publisher’s note Publisher’s note Publication year: 2012 Source:Progress in Nuclear Magnetic Resonance Spectroscopy</br> </br> </br> </br></br>	nmrlearner	Journal club	0	04-24-2012 05:04 PM
Note from the Incoming Editorial Team Note from the Incoming Editorial Team Publication year: 2012 Source:Progress in Nuclear Magnetic Resonance Spectroscopy</br> </br> </br> </br></br>	nmrlearner	Journal club	0	03-21-2012 11:38 AM
[NMR paper] NMR structure note--solution structure of a bacterial BolA-like protein XC975 from a NMR structure note--solution structure of a bacterial BolA-like protein XC975 from a plant pathogen Xanthomonas campestris pv. campestris. Related Articles NMR structure note--solution structure of a bacterial BolA-like protein XC975 from a plant pathogen Xanthomonas campestris pv. campestris. J Biomol NMR. 2005 Feb;31(2):167-72 Authors: Chin KH, Lin FY, Hu YC, Sze KH, Lyu PC, Chou SH	nmrlearner	Journal club	0	11-24-2010 11:14 PM
NMR structure note: oxidized microsomal human cytochrome b5. NMR structure note: oxidized microsomal human cytochrome b5. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--production.springer.de-OnlineResources-Logos-springerlink.gif Related Articles NMR structure note: oxidized microsomal human cytochrome b5. J Biomol NMR. 2010 Aug;47(4):289-95 Authors: Nunez M, Guittet E, Pompon D, van Heijenoort C, Truan G	nmrlearner	Journal club	0	09-24-2010 03:50 AM
NMR structure note: oxidized microsomal human cytochrome b5 NMR structure note: oxidized microsomal human cytochrome b5 Content Type Journal Article DOI 10.1007/s10858-010-9428-6 Authors Marcela Nunez, CNRS Centre de GÃ©nÃ©tique MolÃ©culaire Av. de la Terrasse Gif-sur-Yvette 91198 France Eric Guittet, CNRS Institut de Chimie de Substances Naturelles av. de la Terrasse Gif-sur-Yvette 91198 France Denis Pompon, CNRS Centre de GÃ©nÃ©tique MolÃ©culaire Av. de la Terrasse Gif-sur-Yvette 91198 France	nmrlearner	Journal club	0	08-14-2010 04:19 AM
NMR structure note: UBA domain of CIP75 NMR structure note: UBA domain of CIP75 Content Type Journal Article DOI 10.1007/s10858-010-9397-9 Authors Fabien Kieken, University of Nebraska Medical Center Department of Biochemistry and Molecular Biology and Eppley Cancer Center Omaha NE 68198 USA GaÃ«lle Spagnol, University of Nebraska Medical Center Department of Biochemistry and Molecular Biology and Eppley Cancer Center Omaha NE 68198 USA Vivian Su, University of Hawaii at Manoa Natural Products and Cancer Biology Program, Cancer Research Center of Hawaii Honolulu HI 96813 USA	nmrlearner	Journal club	0	08-14-2010 04:19 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off