[NMR paper] PSCD Domains of Pleuralin-1 from the Diatom Cylindrotheca fusiformis: NMR Structures and Interactions with Other Biosilica-Associated Proteins.
PSCD Domains of Pleuralin-1 from the Diatom Cylindrotheca fusiformis: NMR Structures and Interactions with Other Biosilica-Associated Proteins.
Structure. 2016 Jun 14;
Authors: De Sanctis S, Wenzler M, Kröger N, Malloni WM, Sumper M, Deutzmann R, Zadravec P, Brunner E, Kremer W, Kalbitzer HR
Abstract
Diatoms are eukaryotic unicellular algae characterized by silica cell walls and associated with three unique protein families, the pleuralins, frustulins, and silaffins. The NMR structure of the PSCD4 domain of pleuralin-1 from Cylindrotheca fusiformis contains only three short helical elements and is stabilized by five unique disulfide bridges. PSCD4 contains two binding sites for Ca(2+) ions with millimolar affinity. NMR-based interaction studies show an interaction of the domain with native silaffin-1A as well as with ?-frustulins. The interaction sites of the two proteins mapped on the PSCD4 structure are contiguous and show only a small overlap. A plausible functional role of pleuralin could be to bind simultaneously silaffin-1A located inside the cell wall and ?-frustulin coating the cell wall, thus connecting the interfaces between hypotheca and epitheca at the girdle bands. Restrained molecular dynamics calculations suggest a bead-chain-like structure of the central part of pleuralin-1.
PMID: 27320836 [PubMed - as supplied by publisher]
PSCD Domains of Pleuralin-1 from the Diatom Cylindrotheca fusiformis: NMR Structures and Interactions with Other Biosilica-Associated Proteins
PSCD Domains of Pleuralin-1 from the Diatom Cylindrotheca fusiformis: NMR Structures and Interactions with Other Biosilica-Associated Proteins
Publication date: Available online 16 June 2016
Source:Structure</br>
Author(s): Silvia De*Sanctis, Michael Wenzler, Nils Kröger, Wilhelm*M. Malloni, Manfred Sumper, Rainer Deutzmann, Patrick Zadravec, Eike Brunner, Werner Kremer, Hans*Robert Kalbitzer</br>
Diatoms are eukaryotic unicellular algae characterized by silica cell walls and associated with three unique protein families, the pleuralins,...
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[NMR paper] High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1.
High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1.
Related Articles High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1.
Acta Crystallogr F Struct Biol Commun. 2016 Jun 1;72(Pt 6):500-506
Authors: Jacobsen JO, Allen MD, Freund SM, Bycroft M
Abstract
THO is a multi-protein complex involved in the formation of messenger ribonuclear particles (mRNPs) by coupling transcription with mRNA processing and export. THO is thought to be formed from five subunits, Tho2p, Hpr1p, Tex1p,...
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[NMR paper] Insight into the Supramolecular Architecture of Intact Diatom Biosilica from DNP-Supported Solid-State NMR Spectroscopy.
Insight into the Supramolecular Architecture of Intact Diatom Biosilica from DNP-Supported Solid-State NMR Spectroscopy.
Related Articles Insight into the Supramolecular Architecture of Intact Diatom Biosilica from DNP-Supported Solid-State NMR Spectroscopy.
Angew Chem Int Ed Engl. 2015 Oct 28;
Authors: Jantschke A, Koers E, Mance D, Weingarth M, Brunner E, Baldus M
Abstract
Diatom biosilica is an inorganic/organic hybrid with interesting properties. The molecular architecture of the organic material at the atomic and nanometer...
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10-29-2015 10:08 PM
Nmr characterization of self-association domains promoted by interactions with lc8 hub protein
NMR CHARACTERIZATION OF SELF-ASSOCIATION DOMAINS PROMOTED BY INTERACTIONS WITH LC8 HUB PROTEIN
Publication date: February 2014
Source:Computational and Structural Biotechnology Journal, Volume 9, Issue 14</br>
Author(s): Elisar Barbar , Afua Nyarko</br>
Most proteins in interaction networks have a small number of partners, while a few, called hubs, participate in a large number of interactions and play a central role in cell homeostasis. One highly conserved hub is a protein called LC8 that was originally identified as an essential component of the multi-subunit...
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[NMR paper] NMR Characterization of Self-Association Domains Promoted by Interactions with LC8 Hub Protein.
NMR Characterization of Self-Association Domains Promoted by Interactions with LC8 Hub Protein.
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Comput Struct Biotechnol J. 2014;9:e201402003
Authors: Barbar E, Nyarko A
Abstract
Most proteins in interaction networks have a small number of partners, while a few, called hubs, participate in a large number of interactions and play a central role in cell homeostasis. One highly conserved hub is a protein called LC8...
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[NMR paper] NMR structures of the transmembrane domains of the ?4?2 nAChR.
NMR structures of the transmembrane domains of the ?4?2 nAChR.
http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles NMR structures of the transmembrane domains of the ?4?2 nAChR.
Biochim Biophys Acta. 2012 May;1818(5):1261-8
Authors: Bondarenko V, Mowrey D, Tillman T, Cui T, Liu LT, Xu Y, Tang P
Abstract
The ?4?2 nicotinic acetylcholine receptor (nAChR) is the predominant heteromeric subtype of nAChRs in the brain, which has been implicated in numerous...
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[NMR paper] Fatty acid interactions with proteins: what X-ray crystal and NMR solution structures
Fatty acid interactions with proteins: what X-ray crystal and NMR solution structures tell us.
Related Articles Fatty acid interactions with proteins: what X-ray crystal and NMR solution structures tell us.
Prog Lipid Res. 2004 May;43(3):177-99
Authors: Hamilton JA
The interactions of fatty acids with proteins have been studied by a variety of conventional approaches for decades. However, only limited aspects of fatty acid-protein interactions have been elucidated, even with the integration of information gleaned from the many techniques....
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[NMR paper] NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the D
NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the Drosophila sex-lethal protein with target RNA fragments with site-specific uridine substitutions.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--highwire.stanford.edu-icons-externalservices-pubmed-custom-oxfordjournals_final_free.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the Drosophila sex-lethal protein with...