Related ArticlesProton NMR studies of transforming and nontransforming H-ras p21 mutants.
Biochemistry. 1990 Jan 16;29(2):504-11
Authors: Schlichting I, John J, Frech M, Chardin P, Wittinghofer A, Zimmermann H, Rösch P
One- and two-dimensional nuclear magnetic resonance spectroscopy (1D and 2D NMR) and site-directed mutagenesis were used to study the influence of mutations on the conformation of the H-ras oncogene product p21. No severe structural differences between the different mutants, whether they were transforming or nontransforming, could be detected. Initially, selective incorporation of 3,5-deuterated tyrosyl residues into p21 and 2D NMR were used to identify the resonances representing the spin systems of the imidazole rings of the three histidyl residues in the protein, of six of the nine tyrosyl rings, and of four of the five phenylalanyl rings. The spin systems of the phenyl rings of Phe28, Phe78, and Phe82 could be assigned by using mutant proteins, since no severe structure-induced spectral changes in the aromatic part of the spectra of the mutant proteins were detected. Sequence-specific assignments of the histidine imidazole resonances could be obtained by comparison of the distance information obtained by nuclear Overhauser enhancement spectroscopy (NOESY) experiments with the crystal structure. The change in the chemical shift values of the Hl' proton and the alpha-phosphate of the bound GDP in the NMR spectra of the p21(F28L) mutant and the 28-fold increase in the GDP dissociation rate constants of this mutant suggest a strong interaction between Phe28 and the p21-bound nucleotide. In solution, the p21-bound GDP.Mg2+ has an anti conformation, and the phenyl ring of Phe28 is close to the ribose of the bound GDP.Mg2+.
[NMR paper] Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin
Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: stability, structure, and dynamics of axial ligand complexes.
Related Articles Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: stability, structure, and dynamics of axial ligand complexes.
Proc Natl Acad Sci U S A. 2003 Apr 1;100(7):3778-83
Authors: Shokhireva TKh, Berry RE, Uno E, Balfour CA, Zhang H, Walker FA
WT and leucine --> valine distal pocket mutants of nitrophorin 2 (NP2) and their NO complexes have been...
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11-24-2010 09:01 PM
[NMR paper] Real-time NMR studies on folding of mutants of barnase and chymotrypsin inhibitor 2.
Real-time NMR studies on folding of mutants of barnase and chymotrypsin inhibitor 2.
Related Articles Real-time NMR studies on folding of mutants of barnase and chymotrypsin inhibitor 2.
FEBS Lett. 1998 Feb 13;423(1):110-2
Authors: Killick TR, Freund SM, Fersht AR
The folding and unfolding of proteins is generally assumed to be so co-operative that the overall process may be followed by a single probe, such as tryptophan fluorescence. Folding kinetics of three mutants of barnase and chymotrypsin inhibitor 2 (CI2) were studied by real-time NMR....
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11-17-2010 11:06 PM
[Question from NMRWiki Q&A forum] Problem reading and transforming vendor data using C++/Qt
Problem reading and transforming vendor data using C++/Qt
Hi,
I am a German chemistry Bachelor student (beginning my Master studies in October) and as a spare-time hobby I would like to write an NMR processing program. I would like to release it as free open source software (GPL) written in C++ with a Qt frontend, so that it is platform independent.
As a starting point for writing the libraries to read and transform the vendor data (currently only Bruker) I used the SpinWorks libraries released by Dr Marat (many thanks to him):
...
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08-22-2010 02:30 AM
[NMR paper] Proton NMR studies on ischemic rat brain tissue.
Proton NMR studies on ischemic rat brain tissue.
Related Articles Proton NMR studies on ischemic rat brain tissue.
Magn Reson Med. 1992 May;25(1):78-84
Authors: Iwama T, Yamada H, Andoh T, Sakai N, Era S, Sogami M, Kuwata K, Watari H
The spin-lattice relaxation time (T1) of water protons and the cross-relaxation time (TIS) between irradiated protein protons and observed water protons were measured in order to study water-macromolecular interactions in ischemic rat brain tissues. Tissues were obtained by bilateral common carotid artery...
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08-21-2010 11:41 PM
[NMR paper] Two- and three-dimensional proton NMR studies of apo-neocarzinostatin.
Two- and three-dimensional proton NMR studies of apo-neocarzinostatin.
Related Articles Two- and three-dimensional proton NMR studies of apo-neocarzinostatin.
Biochemistry. 1991 Aug 6;30(31):7730-9
Authors: Gao XL, Burkhart W
Neocarzinostatin (NCS) is an antitumor protein from Streptomyces carzinostaticus that is identical in apo-protein sequence with mitomalcin (MMC) from Streptomyces malayensis. We describe the use of apo-NCS as a model system for applying combined two- and three-dimensional (2D and 3D) proton NMR spectroscopy to the...
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08-21-2010 11:12 PM
[NMR paper] Two- and three-dimensional proton NMR studies of apo-neocarzinostatin.
Two- and three-dimensional proton NMR studies of apo-neocarzinostatin.
Related Articles Two- and three-dimensional proton NMR studies of apo-neocarzinostatin.
Biochemistry. 1991 Aug 6;30(31):7730-9
Authors: Gao XL, Burkhart W
Neocarzinostatin (NCS) is an antitumor protein from Streptomyces carzinostaticus that is identical in apo-protein sequence with mitomalcin (MMC) from Streptomyces malayensis. We describe the use of apo-NCS as a model system for applying combined two- and three-dimensional (2D and 3D) proton NMR spectroscopy to the...
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08-21-2010 11:12 PM
[NMR paper] One- and two-dimensional proton NMR studies of cys-102 S-methylated yeast isozyme-1 f
One- and two-dimensional proton NMR studies of cys-102 S-methylated yeast isozyme-1 ferricytochrome c.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-cellhub.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles One- and two-dimensional proton NMR studies of cys-102 S-methylated yeast isozyme-1 ferricytochrome c.
Biophys J. 1990 Jul;58(1):45-51
Authors: Busse SC, Moench SJ, Satterlee JD
The effect of S-methylating...
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[NMR paper] Proton NMR studies of apo-neocarzinostatin from Streptomyces carzinostaticus. Sequenc
Proton NMR studies of apo-neocarzinostatin from Streptomyces carzinostaticus. Sequence-specific assignment and secondary structure.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif Related Articles Proton NMR studies of apo-neocarzinostatin from Streptomyces carzinostaticus. Sequence-specific assignment and secondary structure.
Eur J Biochem. 1990 Jun 20;190(2):263-71
Authors: Adjadj E, Mispelter J, Quiniou E, Dimicoli JL, Favaudon V, Lhoste JM
The...