NMR paper "In-plant" NMR: Analysis of the Intact Plant Vesicularia dubyana by High Resolution NMR Spectroscopy.

		BioNMR > Educational resources > Journal club
[NMR paper] "In-plant" NMR: Analysis of the Intact Plant Vesicularia dubyana by High Resolution NMR Spectroscopy.

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-12-2015, 10:33 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,777

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

"In-plant" NMR: Analysis of the Intact Plant Vesicularia dubyana by High Resolution NMR Spectroscopy.

"In-plant" NMR: Analysis of the Intact Plant Vesicularia dubyana by High Resolution NMR Spectroscopy.

"In-plant" NMR: Analysis of the Intact Plant Vesicularia dubyana by High Resolution NMR Spectroscopy.

Molecules. 2015;20(3):4359-4368

Authors: Kutyshenko VP, Beskaravayny P, Uversky VN

Abstract
We present here the concept of "in-plant" NMR and show that high-resolution NMR spectroscopy is suitable for the analysis of intact plants and can be used to follow the changes in the intraorganismal molecular composition over long time periods. The NMR-based analysis of the effect of different concentrations of heavy water on the aquatic plant Vesicularia dubyana revealed that due to the presence of specific adaptive mechanisms this plant can sustain the presence of up to 85% of D2O. However, it dies in 100% heavy water.

PMID: 25759953 [PubMed - as supplied by publisher]

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Postdoctoral positions "high field ?MAS-DNP- NMR” and “Rapid melt DNP" From The DNP-NMR Blog: Postdoctoral positions "high field ?MAS-DNP- NMR” and “Rapid melt DNP" Two postdoc positions for “DNP-enhanced NMR” both in the solid and liquid state are available immediately at the Solid State NMR group of the Institute of Molecules and Materials at the Radboud University of Nijmegen. The solid NMR group at the Radboud University specializes in developing innovative technology to perform NMR spectroscopy on very small samples volumes both in the solid and in the liquid state. In the solid phase one can obtain ultrahigh proton decoupling fields (above 1...	nmrlearner	News from NMR blogs	0	06-21-2013 12:16 AM
[NMR tweet] I'd rather write 10 papers as opposed to studying "nuclear magnetic resonance spectroscopy" I'd rather write 10 papers as opposed to studying "nuclear magnetic resonance spectroscopy" Published by sorayyrayy (Soraya) on 2013-05-11T00:10:32Z Source: Twitter	nmrlearner	Twitter NMR	0	05-11-2013 02:38 AM
Journal Highlight: Coupling of a high-resolution monoamine oxidase-A inhibitor assay and HPLC–SPE–NMR for advanced bioactivity profiling of plant extracts Journal Highlight: Coupling of a high-resolution monoamine oxidase-A inhibitor assay and HPLC–SPE–NMR for advanced bioactivity profiling of plant extracts http://www.spectroscopynow.com/common/images/thumbnails/13d26a3428e.jpgA photometric microplate-based high-resolution monoamine oxidase A inhibitor assay was coupled with an HPLC–SPE–tube transfer NMR system for the bioactivity profiling of plant extracts in the search for new antidepressants. Read the rest at Spectroscopynow.com	nmrlearner	General	0	03-04-2013 03:07 PM
"LipoScience, Inc. - Product Pipeline Analysis" Now Available at Fast Market ... - SBWire (press release) <img alt="" height="1" width="1" /> "LipoScience, Inc. - Product Pipeline Analysis" Now Available at Fast Market ... SBWire (press release) It develops proprietary tests based on Nuclear Magnetic Resonance (NMR), a technology that produces a digital analysis of molecules present in a blood sample. The company's flagship product NMR LipoProfile test, measures lipoprotein particles, which ... and more » "LipoScience, Inc. - Product Pipeline Analysis" Now Available at Fast Market ... - SBWire (press release) More...	nmrlearner	Online News	0	02-27-2013 06:47 PM
[NMR tweet] How is "Tyrannosaurus" related to "Nuclear Magnetic Resonance"? http://www.threewiki.com/60YeHE @threewiki How is "Tyrannosaurus" related to "Nuclear Magnetic Resonance"? http://www.threewiki.com/60YeHE @threewiki Published by Jakob7 (Jakob Baumhardt) on 2010-12-04T05:24:13Z Source: Twitter	nmrlearner	Twitter NMR	0	12-04-2010 05:30 AM
[NMR paper] Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensin Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensins, identical backbone with different mechanisms of action. Related Articles Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensins, identical backbone with different mechanisms of action. J Mol Biol. 2002 Jan 25;315(4):749-57 Authors: Almeida MS, Cabral KM, Kurtenbach E, Almeida FC, Valente AP Pisum sativum defensin 1 (Psd1) is a 46 amino acid residue plant defensin isolated from seeds of pea. The three-dimensional structure in...	nmrlearner	Journal club	0	11-24-2010 08:49 PM
[NMR tweet] in late 1945 in "Building 20", NMR (nuclear magnetic resonance) spectroscopy was disc in late 1945 in "Building 20", NMR (nuclear magnetic resonance) spectroscopy was discovered @ MIT by Harvard... http://fb.me/OJmpsZaB Published by Lizzard0126 (Liz O'Day) on 2010-11-24T02:55:51Z Source: Twitter	nmrlearner	Twitter NMR	0	11-24-2010 03:00 AM
2006 NANUC "Road Show" - Non-linear NMR data Acquisition, Processing, and Analysis; July 13-14, 2006 LINK 2006 NANUC "Road Show" - Non-linear NMR data Acquisition, Processing, and Analysis July 13-14 Speakers: Clemens Anklin (Bruker, Canada)	nmrlearner	Conferences	0	05-23-2006 09:44 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off