Related ArticlesNMR Studies of the Dynamics of Nitrophorin 2 Bound to Nitric Oxide.
Biochemistry. 2013 Oct 11;
Authors: Muthu D, Berry RE, Zhang H, Walker FA
Abstract
The Rhodnius nitrophorins are ?-barrel proteins of the lipocalin fold with a heme protruding from the open end of the barrel. They are found in the saliva of the blood-sucking insect Rhodnius prolixus, which synthesizes and stores nitric oxide in the salivary glands, where NO is bound to iron. NO is released by dilution and pH rise when the insect spits its saliva into the tissues of a victim, to aid in obtaining a blood meal. In the adult insect there are four nitrophorins, NP1-NP4. At pH 7.3, NP4 releases NO 17 times faster than does NP2. A number of crystal structures of the least abundant protein, NP4, are available. These structures have been used to propose that two loops between adjacent ?-strands at the front opening of the protein, the A-B and G-H loops, determine the rate of NO release. In order to learn how the protein loops contribute to release of NO for each of the nitrophorins, the dynamics of these proteins are being studied in our laboratory. In this work, NP2-NO has been investigated by pico- to nanosecond and micro- to millisecond NMR techniques at three pH values, 5.0, 6.5, and 7.3. It is found that at pH 5.0 and 6.5 NP2-NO is very rigid and only a few scattered residues show isolated dynamics, while at pH 7.3 somewhat more dynamics are observed. Comparison to other lipocalins shows that all are relatively rigid, and that the dynamics of lipocalins are much more subtle than those 2wof mainly ?-helical proteins.
PMID: 24116947 [PubMed - as supplied by publisher]
Structure of Peptides on Metal Oxide Surfaces Probed by NMR
Structure of Peptides on Metal Oxide Surfaces Probed by NMR
Peter A. Mirau, Rajesh R. Naik and Patricia Gehring
http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/ja205454t/aop/images/medium/ja-2011-05454t_0008.gif
Journal of the American Chemical Society
DOI: 10.1021/ja205454t
http://feeds.feedburner.com/~ff/acs/jacsat?d=yIl2AUoC8zA
http://feeds.feedburner.com/~r/acs/jacsat/~4/twbT3VIr8Xo
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Transferred NOESY NMR studies of biotin mimetic peptide (FSHPQNT) bound to streptavidin: A structural model for studies of peptide-protein interactions.
Transferred NOESY NMR studies of biotin mimetic peptide (FSHPQNT) bound to streptavidin: A structural model for studies of peptide-protein interactions.
Transferred NOESY NMR studies of biotin mimetic peptide (FSHPQNT) bound to streptavidin: A structural model for studies of peptide-protein interactions.
Chem Biol Drug Des. 2011 Feb 5;
Authors: Gizachew D, Dratz E
Protein-protein interactions control signaling, specific adhesion and many other biological functions. The three dimensional structures of the interfaces and bound ligand can be...
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[NMR paper] Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin
Electrochemical and NMR spectroscopic studies of distal pocket mutants of nitrophorin 2: stability, structure, and dynamics of axial ligand complexes.
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Proc Natl Acad Sci U S A. 2003 Apr 1;100(7):3778-83
Authors: Shokhireva TKh, Berry RE, Uno E, Balfour CA, Zhang H, Walker FA
WT and leucine --> valine distal pocket mutants of nitrophorin 2 (NP2) and their NO complexes have been...
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[NMR paper] 1H NMR studies on the CuA center of nitrous oxide reductase from Pseudomonas stutzeri
1H NMR studies on the CuA center of nitrous oxide reductase from Pseudomonas stutzeri.
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Biochemistry. 1999 Aug 24;38(34):11164-71
Authors: Holz RC, Alvarez ML, Zumft WG, Dooley DM
1H NMR spectra of the CuA center of N2OR from Pseudomonas stutzeri, and a mutant enzyme that contains only CuA, were recorded in both H2O- and D2O-buffered solution at pH 7.5. Several sharp, well-resolved hyperfine-shifted 1H NMR signals were observed in the 60 to...
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[NMR paper] The effect of hydration on the dynamics of trimethoprim bound to dihydrofolate reduct
The effect of hydration on the dynamics of trimethoprim bound to dihydrofolate reductase. A deuterium NMR study.
http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-cellhub.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles The effect of hydration on the dynamics of trimethoprim bound to dihydrofolate reductase. A deuterium NMR study.
Biophys J. 1993 Apr;64(4):1361-5
Authors: Yang QX, Huang FY, Huang TH, Gelbaum L
To...
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[NMR paper] NMR studies of the structure and dynamics of membrane-bound bacteriophage Pf1 coat pr
NMR studies of the structure and dynamics of membrane-bound bacteriophage Pf1 coat protein.
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Science. 1991 May 31;252(5010):1303-5
Authors: Shon KJ, Kim Y, Colnago LA, Opella SJ
Filamentous bacteriophage coat protein undergoes a remarkable structural transition during the viral assembly process as it is transferred from the membrane environment of the cell, where it spans the phospholipid bilayer, to the newly extruded virus particles....
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[NMR paper] NMR studies of [U-13C]cyclosporin A bound to cyclophilin: bound conformation and port
NMR studies of cyclosporin A bound to cyclophilin: bound conformation and portions of cyclosporin involved in binding.
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Biochemistry. 1991 Jul 2;30(26):6574-83
Authors: Fesik SW, Gampe RT, Eaton HL, Gemmecker G, Olejniczak ET, Neri P, Holzman TF, Egan DA, Edalji R, Simmer R
Cyclosporin A (CsA), a potent immunosuppressant, is known to bind with high specificity to cyclophilin (CyP), a 17.7 kDa protein with...
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[NMR paper] NMR studies of [U-13C]cyclosporin A bound to cyclophilin: bound conformation and port
NMR studies of cyclosporin A bound to cyclophilin: bound conformation and portions of cyclosporin involved in binding.
Related Articles NMR studies of cyclosporin A bound to cyclophilin: bound conformation and portions of cyclosporin involved in binding.
Biochemistry. 1991 Jul 2;30(26):6574-83
Authors: Fesik SW, Gampe RT, Eaton HL, Gemmecker G, Olejniczak ET, Neri P, Holzman TF, Egan DA, Edalji R, Simmer R
Cyclosporin A (CsA), a potent immunosuppressant, is known to bind with high specificity to cyclophilin (CyP), a 17.7 kDa protein with...