NMR studies of DNA microcapsules prepared using sonochemical methods.
Phys Chem Chem Phys. 2014 Dec 3;
Authors: Reytblat I, Keinan-Adamsky K, Chill JH, Gottlieb HE, Gedanken A, Goobes G
Abstract
DNA molecules were recently converted using ultrasonic irradiation into microcapsules that can trap hydrophobic molecules in aqueous solution. These DNA microcapsules are capable of penetrating prokaryotic and eukaryotic cells, delivering drugs and transferring genetic information e.g. for protein expression into the host cells. DNA molecules of different sizes and structures can be assembled into spherical capsules, but to date, the interactions that hold them together in these large structural constructs are unknown. In the current study, capsules prepared from a 12 base double helix DNA were investigated using NMR spectroscopy. Solution NMR studies of the DNA emulsion reveal DNA molecules with a perturbed structure with a size similar to the precursor DNA based on diffusion NMR measurements. 2D NMR correlation measurements and chemical shift perturbation analysis show partial unzipping of AT base pairs in the centre of the modified duplex, freeing nucleoside bases to interact with other bases on other precursor molecules thereby facilitating aggregation. Slow tumbling of the microspheres renders them invisible in solution NMR spectra; therefore magic angle spinning NMR measurements are performed which provide limited evidence of the DNA in the microcapsule state.
PMID: 25470741 [PubMed - as supplied by publisher]
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Abstract
NMR structural studies of large monomeric and multimeric proteins face distinct challenges. In large monomeric proteins, the common occurrence of frequency degeneracies between residues impedes unambiguous assignment of NMR signals. To overcome this barrier, nonuniform...
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NMR methods for structural studies of large monomeric and multimeric proteins
NMR methods for structural studies of large monomeric and multimeric proteins
Publication date: Available online 11 July 2013
Source:Current Opinion in Structural Biology</br>
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NMR structural studies of large monomeric and multimeric proteins face distinct challenges. In large monomeric proteins, the common occurrence of frequency degeneracies between residues impedes unambiguous assignment of NMR signals. To overcome this barrier, nonuniform sampling (NUS) is used to...
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[NMR paper] Carbohydrate-protein interaction studies by laser photo CIDNP NMR methods.
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